| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4202298 = | 57 (0.890) | 4 (0.060) | 4/246 | NT | 7.3% | coding (5478/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4202318 = | 47 (0.760) | coding (5458/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
GCCAGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCG > NC_002947/4202173‑4202463 | gCCAGGGCAGCAGCCACCGTCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCaa < 3:262185/148‑1 (MQ=255)gCCAGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAg < 5:245369/149‑1 (MQ=255) ccAGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAgg > 1:231381/1‑149 (MQ=255) cAGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAGATGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGt > 2:76015/1‑149 (MQ=255) aGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTc < 2:231381/149‑1 (MQ=255) gcagcaGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGATATGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAAt < 1:76015/149‑1 (MQ=255) gcagcCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAAtgtg > 5:95409/1‑149 (MQ=255) ctTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCaga < 6:231873/149‑1 (MQ=255) gAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTc < 1:184295/148‑1 (MQ=255) aaCGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCga < 4:363885/149‑1 (MQ=255) aaCGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCga < 1:252445/149‑1 (MQ=255) aCGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCgag < 7:366718/149‑1 (MQ=255) gggCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACAGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCACAGAGTCGAGaa > 7:239120/1‑149 (MQ=255) ggCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAAc < 6:17069/149‑1 (MQ=255) gCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGaa > 3:402392/1‑147 (MQ=255) acccacGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGGTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCtt > 1:287725/1‑149 (MQ=255) acccacGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCtt > 4:293483/1‑149 (MQ=255) ccacGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTgg > 7:273415/1‑149 (MQ=255) ccAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGccc < 6:106109/148‑1 (MQ=255) ccAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCcg > 2:393877/1‑149 (MQ=255) cAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCcgc < 8:184104/149‑1 (MQ=255) cAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCcgc < 2:322708/149‑1 (MQ=255) aaaaTTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCcgcg < 4:402392/149‑1 (MQ=255) aaaTTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGt > 7:131059/1‑149 (MQ=255) gCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCg < 6:95409/148‑1 (MQ=255) ctctGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCaa < 1:393877/149‑1 (MQ=255) ccAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGtt > 8:46616/1‑148 (MQ=255) ccAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGtt > 3:338213/1‑148 (MQ=255) cAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCa < 6:392297/113‑1 (MQ=255) cAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCa > 5:392297/1‑113 (MQ=255) aaGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGc < 1:40314/124‑1 (MQ=255) aaGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGc > 2:40314/1‑124 (MQ=255) cGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCgag > 7:166636/1‑99 (MQ=255) cGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCgag < 8:166636/99‑1 (MQ=255) gTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGc > 2:73214/1‑149 (MQ=255) gCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTc < 2:287725/148‑1 (MQ=255) ccACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGcc > 2:245342/1‑149 (MQ=255) cACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCa < 8:14979/149‑1 (MQ=255) gctgttctcgactctgcgcccagagcacattgaccttgCCCGACCGCTTGCGTCCGGGCAAg < 6:211314‑M1/24‑1 (MQ=255) cctgttctcgactctgcgcccagagcacattgaccttgCCCGACCGCTTGCGTCCGGGCAAg > 5:211314‑M1/39‑62 (MQ=255) cTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTGAATCGCAACGTTTAGTCGACGCTCGCCACCt < 1:245342/149‑1 (MQ=255) ggCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGa < 8:131059/148‑1 (MQ=255) aaaCTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGAt > 5:314782/1‑149 (MQ=255) tCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCa < 6:305370/70‑1 (MQ=255) aGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGcc > 1:408359/1‑148 (MQ=255) tGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCaaa < 2:408359/149‑1 (MQ=255) aGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCa < 1:396823/148‑1 (MQ=255) aGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCa < 4:320951/148‑1 (MQ=255) ggTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCAtt < 4:374126/149‑1 (MQ=255) tCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGa < 6:314782/149‑1 (MQ=255) aCGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGAc < 4:338213/148‑1 (MQ=255) cttgcccggacgcaagcggtcgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACagg > 5:211314‑M2/25‑61 (MQ=255) cttgcccggacgcaagcggtcgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGc < 6:211314‑M2/38‑1 (MQ=255) ccggacgcaagcggtcgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGaa > 4:41207‑M2/20‑53 (MQ=255) ccggacgcaagcggtcgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGaa < 3:41207‑M2/34‑1 (MQ=255) ccGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGgca < 3:293483/149‑1 (MQ=255) gTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCttt > 4:296140/1‑149 (MQ=255) tCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTc > 4:331541/1‑149 (MQ=255) cgggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTccc > 5:116293‑M2/5‑149 (MQ=255) gggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCg > 2:134591‑M2/4‑149 (MQ=255) gggCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCACCTTTCCCg > 6:15670‑M2/4‑149 (MQ=255) | GCCAGGGCAGCAGCCACCGCCTCTTCGAACGGGCTGTCGAATCCACCCACGCTGCCAAAATTAGCCTCTGCCAAGGCTCGTGGCCCACGCTCGGCAAACTCGAGGAAGTGCTTAAGGTCACGTACCCCGACCGCTTGCGTCCGGGCAAGGTCAATGTGCTCTGGGCGCAGAGTCGAGAACAGCACCAACTCTTGGCGAGCCCGCGTG‑ATCGCAACGTTTAGTCGACGCTCGCCACCTGGACGATTCATAGGGCCAAAGTTCATTGACATAACCCCGGCAGCATCTTTCCCG > NC_002947/4202173‑4202463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |