New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4210980	61 (0.950)	7 (0.120)	7/240	NT	11.5%	coding (97/285 nt)	PP_5621	hypothetical protein
	?	NC_002947	= 4210995	50 (0.830)					coding (82/285 nt)	PP_5621	hypothetical protein

CCAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4210826‑4210980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaagTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAGCCATCCGGGAGCTCAT  <  NC_002947/4210995‑4210850                                                                                                                                                                                                                                                                                                               CCAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCA                                                                                                                                                          >  7:123844/1‑149       CCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATTATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAA                                                                                                                                                     <  7:162365/148‑1                            AGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGC                                                                                                                                <  3:21320/148‑1                                                    ATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCAT                                                                                                                              >  5:3922/1‑126                                                    ATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCAT                                                                                                                              <  6:3922/126‑1                                                                  CCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAG                                                                                                          <  7:107899/132‑1                                                                  CCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAG                                                                                                          >  8:107899/1‑132                                                                       TTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                                                    >  5:335455/1‑85                                                                       TTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                                                    <  6:335455/85‑1                                                                                     TCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTT                                                                                                                          >  5:328266/1‑97                                                                                     TCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGTCTTGCATTCCGCAGCTTGCATGCTT                                                                                                                          <  6:328266/97‑1                                                                                                                                                         AAGTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAGCCATCCGGGAGCTCAT  >  4:395837/1‑149                                                                                                                                                         AAGTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAGCCATCCGGGAGCTCAT  >  6:44502/1‑149                                                                                                                                                           GTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAG                  <  3:408075/131‑1                                                                                                                                                           GTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAG                  >  4:408075/1‑131                                                                                                                                                                                                                                                                                                               CCAATACCGATCAAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4210826‑4210980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaagTCTTGCATTCCGCAGCTTGCATGCTTGTGTCAGTGGTTGGAGATTGAGATGCAACCTCAAAAAACTAGAAATCATCTGATCAACGAGCGCGAAGCTGCAAGTCGGCTGCGTCACTTCATGGAGGCGACAGCCATCCGGGAGCTCAT  <  NC_002947/4210995‑4210850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.