New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4210980	61 (0.950)	7 (0.120)	7/240	NT	11.5%	coding (97/285 nt)	PP_5621	hypothetical protein
	?	NC_002947	= 4210995	50 (0.830)					coding (82/285 nt)	PP_5621	hypothetical protein

AAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTC  >  NC_002947/4210838‑4211127                                                                                                                                                |                                                                                                                                                    aaGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCCGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCgg                                                                                                                                               <  1:344904/149‑1 (MQ=255)   gCTAACGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGaa                                                                                                                                             <  7:256667/149‑1 (MQ=255)       ccGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATg                                                                                                                                           <  6:198707/147‑1 (MQ=255)        cGGCGATGTGCTCCCGGATGGCTGTCGCCTCCATGTAGTGACGCAGCCGACTTGCAGCTTCT‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCaa                                                                                                                                        <  2:312634/149‑1 (MQ=255)        cGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGc                                                                                                                                          >  5:280346/1‑147 (MQ=255)         ggCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGc                                                                                                                                          >  2:373257/1‑146 (MQ=255)             aTGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGActt                                                                                                                                   >  4:395837‑M2/1‑146 (MQ=255)             aTGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGActt                                                                                                                                   >  6:44502‑M2/1‑146 (MQ=255)                aGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgc                                                                                                                                 <  3:21320‑M1/148‑21 (MQ=255)                   tCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGAGGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGAAAGCTGCGGAATGCAAGACTAGCATc                                                                                                                              >  1:308460/1‑149 (MQ=255)                     ccGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCca                                                                                                                            >  8:341402/1‑148 (MQ=255)                     ccGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCca                                                                                                                            <  6:69017/148‑1 (MQ=255)                     ccGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGAAGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCcac                                                                                                                           <  6:234848/149‑1 (MQ=255)                      cGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCca                                                                                                                            >  1:377528/1‑147 (MQ=255)                        gATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCca                                                                                                                            >  3:129362/1‑145 (MQ=255)                        gATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCca                                                                                                                            <  4:129362/145‑1 (MQ=255)                             cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATg                                                                                                                                           >  4:41160/1‑125 (MQ=255)                             cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATg                                                                                                                                           <  3:41160/125‑1 (MQ=255)                             cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGAc                                                                                                                                     <  3:408075‑M2/131‑2 (MQ=255)                             cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGAc                                                                                                                                     >  4:408075‑M2/1‑130 (MQ=255)                                   ccTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATc                                                                                                             <  2:377528/149‑1 (MQ=255)                                    cTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCt                                                                                                            >  2:261378/1‑149 (MQ=255)                                     tCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTg                                                                                                           >  7:276305/1‑149 (MQ=255)                                        aTGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcat                                                                                                                               <  6:3922‑M1/126‑23 (MQ=255)                                        aTGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcat                                                                                                                               >  5:3922‑M1/1‑104 (MQ=255)                                              tGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACt                                                                                                  <  1:373257/149‑1 (MQ=255)                                                   cAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGaa                                                                                             <  6:280346/149‑1 (MQ=255)                                                      ccGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcatgcttgtgtcagtggttggag                                                                                                           <  7:107899‑M1/132‑43 (MQ=255)                                                      ccGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcatgcttgtgtcagtggttggag                                                                                                           >  8:107899‑M1/1‑90 (MQ=255)                                                       cGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAcc                                                                                         >  2:7509/1‑149 (MQ=255)                                                          cTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCttt                                                                                      <  8:123844/149‑1 (MQ=255)                                                           ttGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                                                     <  6:335455‑M1/85‑1 (MQ=255)                                                           ttGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAG                                                                                                                                                     >  5:335455‑M1/1‑85 (MQ=255)                                                              cAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTtcctc                                                                                  <  1:261378/149‑1 (MQ=255)                                                                gCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTcctcct                                                                                <  4:380992/149‑1 (MQ=255)                                                                     cgagcTCGTTGATGAGATTATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTca                                                                              <  8:276305/144‑1 (MQ=255)                                                                        gcTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCagcagc                                                                         <  7:115895/149‑1 (MQ=255)                                                                          tCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcatgctt                                                                                                                           >  5:328266‑M1/1‑71 (MQ=255)                                                                          tCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGtcttgcattccgcagcttgcatgctt                                                                                                                           <  6:328266‑M1/97‑27 (MQ=255)                                                                             ttGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAg                                                                    >  2:57412/1‑149 (MQ=255)                                                                                 tCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGCATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTg                                                                >  6:18016/1‑149 (MQ=255)                                                                                  cAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTg                                                                >  4:146768/1‑148 (MQ=255)                                                                                   aGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAATAATGAAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAACTTTCCTCCTCAGCAGCCACAGCTTGTa                                                              >  1:97048/1‑149 (MQ=255)                                                                                    gatgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt                                                             >  3:287869/1‑149 (MQ=255)                                                                                    gatgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt                                                             >  3:376387/1‑149 (MQ=255)                                                                                     atgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAtt                                                            >  1:76709/1‑149 (MQ=255)                                                                                        atTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCTATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTTTTGa                                                          <  2:308460/148‑1 (MQ=255)                                                                                         tttCTAGTTTTATGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATTCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGAc                                                         <  8:267045/148‑1 (MQ=255)                                                                                          ttCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACt                                                        >  3:207352/1‑148 (MQ=255)                                                                                             tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCcac                                                                                                                           >  1:143583/1‑78 (MQ=255)                                                                                             tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCcac                                                                                                                           <  2:143583/78‑1 (MQ=255)                                                                                             tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTca                                                                              >  6:360194/1‑123 (MQ=255)                                                                                             tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTca                                                                              <  5:360194/123‑1 (MQ=255)                                                                                               gTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGt                                                  <  2:76709/149‑1 (MQ=255)                                                                                                ttttttGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATACAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCtt                                                                                       <  7:156341/111‑1 (MQ=255)                                                                                                ttttttGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATACAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCtt                                                                                       >  8:156341/1‑111 (MQ=255)                                                                                                   tttGATGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTTCATCCACAGCAATTCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGACACAGCTTGTATTGACTCACCGtctc                                               <  2:97048/148‑1 (MQ=255)                                                                                                            gCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGt                                      >  2:217094/1‑148 (MQ=255)                                                                                                              aTCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAg                                   <  4:287869/149‑1 (MQ=255)                                                                                                                 tcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGaaa                                >  8:36774/1‑149 (MQ=255)                                                                                                                 tcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGaaa                                >  6:194425/1‑149 (MQ=255)                                                                                                                      ctcCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcgg                                            <  7:107899‑M2/132‑91 (MQ=255)                                                                                                                      ctcCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcgg                                            >  8:107899‑M2/1‑42 (MQ=255)                                                                                                                         cAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCAcc                           <  4:376387/146‑1 (MQ=255)                                                                                                                           aCCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATg                      <  5:194425/149‑1 (MQ=255)                                                                                                                                tGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCTCCTGGa                                        <  1:327152/126‑1 (MQ=255)                                                                                                                                tGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACATTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTCGa                                        >  2:327152/1‑126 (MQ=255)                                                                                                                                  acacAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCCCAGCTTGTATTGACTCACCGTCTCGCCTGGa                                        <  3:159383/124‑1 (MQ=255)                                                                                                                                  acacAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGa                                        >  4:159383/1‑124 (MQ=255)                                                                                                                                  acacAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAagag                <  7:341402/148‑1 (MQ=255)                                                                                                                                  acacAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAaga                 <  6:198787/147‑1 (MQ=255)                                                                                                                                  acacAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTCCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCCTCACGCCTGGAGTTAGAAATCACCTAAAGCAAGAGc               >  2:193033/1‑149 (MQ=255)                                                                                                                                      aaGCATGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacga                                                               <  6:328266‑M2/97‑72 (MQ=255)                                                                                                                                      aaGCATGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacga                                                               >  5:328266‑M2/1‑26 (MQ=255)                                                                                                                                      aaGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa                                                          >  4:259082/1‑102 (MQ=255)                                                                                                                                      aaGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa                                                          <  3:259082/102‑1 (MQ=255)                                                                                                                                      aaGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTAt           >  4:252369/1‑149 (MQ=255)                                                                                                                                        gCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGa         <  1:7509/149‑1 (MQ=255)                                                                                                                                          aTGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcat                              <  6:3922‑M2/126‑105 (MQ=255)                                                                                                                                          aTGCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcat                              >  5:3922‑M2/1‑22 (MQ=255)                                                                                                                                            gCAAGCTGCGGAATGCAAGActtgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcatggaggcgacagccatccgggagct      <  3:21320‑M2/148‑129 (MQ=255)                                                                                                                                              aaGtcttgcattccgcagcttgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcatggaggcgacagccatccgggagctcat   >  6:44502‑M1/1‑3 (MQ=255)                                                                                                                                              aaGtcttgcattccgcagcttgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcatggaggcgacagccatccgggagctcat   >  4:395837‑M1/1‑3 (MQ=255)                                                                                                                                               aGCTTCGGAATGCAAGACTTGCATCCACATCAATTCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCGACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTc  <  1:193033/149‑1 (MQ=255)                                                                                                                                               aGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTc  <  1:57412/149‑1 (MQ=255)                                                                                                                                                gtcttgcattccgcagcttgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcatggaggcgacag                   <  3:408075‑M1/131‑131 (MQ=255)                                                                                                                                                gtcttgcattccgcagcttgcatgcttgtgtcagtggttggagattgagatgcaacctcaaaaaactagaaatcatctgatcaacgagcgcgaagctgcaagtcggctgcgtcacttcatggaggcgacag                   >  4:408075‑M1/1‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    AAGCTACCGGCGATGAGCTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCG‑CGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCATCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTC  >  NC_002947/4210838‑4211127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.