New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5033495 =	0 (0.000)	4 (0.070)	3/240	NT	100%	coding (251/321 nt)	PP_4437	transposase
	?	NC_002947	5036419 =	NA (NA)					coding (227/321 nt)	PP_4441	transposase

CCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5033649‑5033495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcaTCGAGTTGCCTATGACCGGGCAAGTGATCACGGTGAAAT  >  NC_002947/5036419‑5036457                                                                                                                                                                                                      CCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCG                                               <  8:211936/149‑1    CAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGA                                            <  3:143196/149‑1    CAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGA                                            <  4:238785/149‑1    CAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGA                                            >  3:75699/1‑149     AATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGAT                                           <  2:94255/149‑1      ATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATC                                          <  4:75699/149‑1      ATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGAT                                           >  8:123777/1‑148      ATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATC‑‑GCATCGATGCGCATCAATGAGCGAAAGCCCGAATAAAATGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGAT                                           >  8:135791/1‑148          CCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATGGAGAATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCAa                                        >  1:121832/1‑148           CCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTG                                             <  1:325749/141‑1           CCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTG                                             >  2:325749/1‑141                           TCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGA                                            >  5:265129/1‑126                           TCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGA                                            <  6:265129/126‑1                                         CATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGT       <  2:340920/149‑1                                          ATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATC‑‑‑‑AGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAAT  <  1:77923/149‑1                                          ATGCCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAACTTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATC                                          <  2:363873/113‑1                                            GTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCG                                               >  7:241688/1‑106                                            GTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCG                                               <  8:241688/106‑1                                                             CCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGT                                              >  5:221300/1‑90                                                             CCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGT                                              <  6:221300/90‑1                                                                 CCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCGATTTCACCGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGT       >  4:226857/1‑125                                                                 CCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGT       <  3:226857/125‑1                                                                                                                                                                                                      CCGCAATCACCCGGGCCAATGCTGTCTCGGTGCCAGCGCGCATGTCCATCGGCTCGGTGGCCAGCCAGATG‑‑GCATCGATGCGGATCATTGAGCGAAAGCCCGAATAAATTGCGCACAACCCTCGGGATCCGAGGCTGGCCATTTCACCGTGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5033649‑5033495 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcaTCGAGTTGCCTATGACCGGGCAAGTGATCACGGTGAAAT  >  NC_002947/5036419‑5036457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.