New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5033495 =	0 (0.000)	4 (0.070)	3/240	NT	100%	coding (251/321 nt)	PP_4437	transposase
	?	NC_002947	5036419 =	NA (NA)					coding (227/321 nt)	PP_4441	transposase

CGTCAGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGGG  >  NC_002947/5033459‑5033640                                     |                                                                                                                                                    atttcaccgtgatcacttgcccggccacgggcaact‑GATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATCTGGCTGGCCACCGAGCCGATGGACAt                                  <  1:77923‑M1/113‑1 (MQ=255)   accgtgatcacttgcccggccacgggcaactcgaTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATctgg                                                         <  3:226857‑M1/91‑1 (MQ=255)   accgtgatcacttgcccggccacgggcaactcgaTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATCTGGCTGGCCACCGAGCCGATGGACATg                                 <  2:340920‑M1/115‑1 (MQ=255)   accgtgatcacttgcccggccacgggcaactcgaTGATCACGGTGAAATCGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATctgg                                                         >  4:226857‑M1/35‑125 (MQ=255)                                    tTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATTCTCCATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCggg  >  1:121832‑M1/2‑149 (MQ=255)                                     |                                                                                                                                                    CGTCAGTGATCATCGAGTTGCCCGTGGCCGGGCAAGTGATCACGGTGAAATGGCCAGCCTCGGATCCCGAGGGTTGTGCGCAATTTATTCGGGCTTTCGCTCAATGATCCGCATCGATGC‑‑CATCTGGCTGGCCACCGAGCCGATGGACATGCGCGCTGGCACCGAGACAGCATTGGCCCGGG  >  NC_002947/5033459‑5033640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.