New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5051331 =	74 (1.160)	4 (0.070)	4/242	NT	5.6%	intergenic (‑271/+103)	PP_5687/PP_4452	MFS transporter/NAD/NADP octopine/nopaline dehydrogenase family protein
	?	NC_002947	5051401 =	64 (1.050)					intergenic (‑341/+33)	PP_5687/PP_4452	MFS transporter/NAD/NADP octopine/nopaline dehydrogenase family protein

CTTGAGTCCGAGTCTATGGAAGGGCTACTGGCGCGTGTAGCTGCAGCGTAAGCTGATACCTGATGTAATGCAGGGCGATAGTCTGAGCGGGGAGTGGCTGATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5051484‑5051331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctcAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGACTCAAGGTTCAGTCCCTCAACCAGATCGTTTTCGTTAGAGAAACCGTCTGGCAGCAGTAGGGCCGACA  >  NC_002947/5051401‑5051546                                                                                                                                                                                                                                                                                                              CTTGAGTCCGAGTCTATGGAAGGGCTACTGGCGCGTGTAGCTGCAGCGTAAGCTGATACCTGATGTAATGCAGGGCGATAGTCTGAGCGGGGAGTGGCTGATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTC                                                                                                                                                         <  7:290068/149‑1                                                                                  TCTGAGCGGGGAGTGGCTGATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTCCGCTCAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCG                                                                        >  5:236889/1‑149                                                                                    TGAGCGGGGAGTGGCTGATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTCCGCTCAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGA                                                                      >  7:55931/1‑149                                                                                                     ATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTCCGCTCAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGACTCAAGGTTCAGTCCC                                                      <  6:236889/148‑1                                                                                                                        ATGACATGGAATCGCCACTGATATTTCCTCCGCTCAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGACTCAAGGTTCAGTCCCTCAACCAGATCGTTTTCGT                                   <  8:55931/148‑1                                                                                                                                                        CTCAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGACTCAAGGTTCAGTCCCTCAACCAGATCGTTTTCGTTAGAGAAACCGTCTGGCAGCAGTAGGGCCGACA  <  8:362702/149‑1                                                                                                                                                                                                                                                                                                              CTTGAGTCCGAGTCTATGGAAGGGCTACTGGCGCGTGTAGCTGCAGCGTAAGCTGATACCTGATGTAATGCAGGGCGATAGTCTGAGCGGGGAGTGGCTGATGTCCATGGCAGATATTTATGACATGGAATCGCCACTGATATTTCCTCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5051484‑5051331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctcAGACTATCGCCCTGCATTACATCAGGTATCAGCTTACGCTGCAGCTACACGCGCCAGTAGCCCTTCCATAGACTCGGACTCAAGGTTCAGTCCCTCAACCAGATCGTTTTCGTTAGAGAAACCGTCTGGCAGCAGTAGGGCCGACA  >  NC_002947/5051401‑5051546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.