New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5131760	62 (0.970)	4 (0.070)	4/242	NT	5.9%	coding (114/588 nt)	PP_4517	hypothetical protein
	?	NC_002947	= 5131789	69 (1.130)					coding (143/588 nt)	PP_4517	hypothetical protein

TAGAATTCGTTATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5131608‑5131760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatcCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTACAG  <  NC_002947/5131789‑5131642                                                                                                                                                                                                                                                                                                               TAGAATTCGTTATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTC                                                                                                                                                          >  1:370991/1‑149   ccgatctTTATCGTTTATTCCCCAAGGGAGCCCTTTAATGTCCTTCGCCTAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGA                                                                                                                                                        <  8:310342/142‑1   GAATTCGTTATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGA                                                                                                                                                        <  5:3587/149‑1     ATTCGTTATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGAT                                                                                                                                                       <  8:83132/148‑1           TATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCAACCTCACCGCTCTTTCGA                                                                                                                                                        >  7:310342/1‑141               GTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCCATTCGCGCT                                                                                                                                            >  6:385069/1‑149                                           TCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAG                                                                                                                <  5:385069/149‑1                                                               CCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGG                                                                                                           >  1:169580/1‑134                                                               CCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGG                                                                                                           <  2:169580/134‑1                                                                                                                                                       ATCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTAC    <  3:127024/149‑1                                                                                                                                                        TCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTA     >  2:370991/1‑147                                                                                                                                                        TCCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTA     >  3:390637/1‑147                                                                                                                                                         CCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTACAG  >  8:356870/1‑149                                                                                                                                                         CCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTG                                     <  1:211305/114‑1                                                                                                                                                         CCATTCGCGCTCGGGCACGTCCTCCGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTG                                     >  2:211305/1‑114                                                                                                                                                                                                                                                                                                               TAGAATTCGTTATCGTTTATTCCCCAAGGTAGCCCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5131608‑5131760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatcCATTCGCGCTCGGGCACGTCCTCGGCGTTGATCGAAAGAGCGGTGAGGTAGCCGTGTGCGGCGACATAGTCCAGCGCTTCTTCGTGCAGCTCGTCGGCGTCGAGGAAGGCTTGCAGGCGGGTCAGTTGCTCGGCGAAGGACATTACAG  <  NC_002947/5131789‑5131642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.