New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 513176062 (0.970)4 (0.070) 4/242 NT 5.9% coding (114/588 nt) PP_4517 hypothetical protein
?NC_002947 = 5131789 69 (1.130)coding (143/588 nt) PP_4517 hypothetical protein

CCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGCGACCTCGACCT  >  NC_002947/5131641‑5131936
                                                                                                                                                    |                                                                                                                                                   
ccTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATg                                                                                                                                                     >  4:390637/1‑149 (MQ=255)
 cTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGg                                                                                                                                                    >  8:356870‑M2/1‑148 (MQ=255)
   gTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGgat                                                                                                                                                  <  3:127024‑M2/149‑4 (MQ=255)
    tAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGga                                                                                                                                                   >  3:390637‑M2/1‑145 (MQ=255)
    tAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGga                                                                                                                                                   >  2:370991‑M2/1‑145 (MQ=255)
                ccGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTc                                                                                                                                     <  5:299138/149‑1 (MQ=255)
                ccGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTc                                                                                                                                     <  6:159592/149‑1 (MQ=255)
                 cGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTc                                                                                                                                     >  5:330402/1‑148 (MQ=255)
                 cGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTc                                                                                                                                     <  6:330402/148‑1 (MQ=255)
                      atcTGACCCGCCTGCAATCCTTCCTCGACGGCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGACCTGTTCGCCgag                                                                                                                               <  8:14365/147‑1 (MQ=255)
                       aCTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAATAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGGGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCgagg                                                                                                                              <  5:419331/149‑1 (MQ=255)
                       aCTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCgagg                                                                                                                              <  4:127024/149‑1 (MQ=255)
                             ccGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCg                                                                                                                         >  4:1671/1‑148 (MQ=255)
                               gCCTGCAAGCCTTCCTCGACGCCTACGAGCGGCACGTAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCga                                                                                                                                <  4:63652/139‑1 (MQ=255)
                               gCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCga                                                                                                                                >  3:63652/1‑139 (MQ=255)
                                   gCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACg                                                                                                                  >  8:367656/1‑149 (MQ=255)
                                    cAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCGGAGGACGTGCCCGAGCGCGAATGg                                                                                                                                                    >  2:211305‑M2/1‑113 (MQ=255)
                                    cAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGg                                                                                                                                                    <  1:211305‑M2/114‑2 (MQ=255)
                                     aaGCCTTCCTCGACGCCGAAGAGCTGCACGAAGAAGCTCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCAGAGGACTTGCCCGAGAGAGAATGGATCGACGCCCTGTTCGCCGATGAGCCTCAATActc                                                                                                                 >  8:75608/1‑146 (MQ=255)
                                      aGCCTTCCTCGACGCCTACGAGCTGCACGATGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATGGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCa                                                                                                               <  7:75608/149‑1 (MQ=255)
                                      aGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCa                                                                                                               <  1:405235/149‑1 (MQ=255)
                                            ccTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAg                                                                                                         >  5:189763/1‑149 (MQ=255)
                                            ccTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAg                                                                                                         >  3:250981/1‑149 (MQ=255)
                                             cTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCGGAGGAGCCGCACTACGCCAGCGAAGc                                                                                                        >  8:283964/1‑149 (MQ=255)
                                              tCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGcc                                                                                                       >  2:31177/1‑149 (MQ=255)
                                               cGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGcc                                                                                                       >  7:165909/1‑148 (MQ=255)
                                                  cGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGGCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAgc                                                                                                   <  8:352284/149‑1 (MQ=255)
                                                     cgacgaGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCa                                                                                                >  1:170840/1‑149 (MQ=255)
                                                                aCGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAg                                                                                     <  3:402398/149‑1 (MQ=255)
                                                                 cGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAgg                                                                                    <  4:250981/149‑1 (MQ=255)
                                                                 cGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAgg                                                                                    >  3:84408/1‑149 (MQ=255)
                                                                  gaagaaGCGCTGGACTATGTCGCCGCACACGGCTACCCCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGc                                                                                   >  4:389819/1‑149 (MQ=255)
                                                                       agCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCAcc                                                                               <  3:1671/148‑1 (MQ=255)
                                                                        gcgcTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCg                                                                                                            >  1:138000/1‑118 (MQ=255)
                                                                        gcgcTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCg                                                                                                            <  2:138000/118‑1 (MQ=255)
                                                                        gcgcTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCt                                                                             >  3:272819/1‑149 (MQ=255)
                                                                             ggACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCtggtgg                                                                        >  6:313273/1‑149 (MQ=255)
                                                                               aCTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCCAGATCGAGGCCACCCTGGTGgcg                                                                      >  5:134391/1‑149 (MQ=255)
                                                                                   tGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTc                                                                   >  6:195065/1‑148 (MQ=255)
                                                                                   tGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTc                                                                   >  1:359247/1‑148 (MQ=255)
                                                                                   tGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCAGGGTGgcctc                                                                    <  1:31177/147‑4 (MQ=255)
                                                                                   tGTCGCCGCACACGGCTACCTCACCGCTCTTTCGAGCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCt                                                                    <  7:367656/147‑1 (MQ=255)
                                                                                    gTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTc                                                                   >  3:223892/1‑147 (MQ=255)
                                                                                       gccgcACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAgg                                                               >  3:220715/1‑148 (MQ=255)
                                                                                       gccgcACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAgg                                                               >  8:341656/1‑148 (MQ=255)
                                                                                         cgcACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGca                                                             >  3:164321/1‑148 (MQ=255)
                                                                                                ggCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGc                                                     <  4:272819/149‑1 (MQ=255)
                                                                                                  cTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCtgg                                                                           >  4:26765/1‑125 (MQ=255)
                                                                                                  cTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCtgg                                                                           <  3:26765/125‑1 (MQ=255)
                                                                                                     ccTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGcc                                                <  4:84408/149‑1 (MQ=255)
                                                                                                       tCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAg                                              >  7:9007/1‑149 (MQ=255)
                                                                                                         aCCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCt                                            >  7:325409/1‑149 (MQ=255)
                                                                                                          ccGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGgatcgaaagagcggtgaggtagccgtgtgcggcgacatagtccagcgcttcttcgtgcagctcgtcggcgtcgaggaaggcttgcaggcgg                                                          <  2:169580‑M2/134‑92 (MQ=255)
                                                                                                          ccGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGgatcgaaagagcggtgaggtagccgtgtgcggcgacatagtccagcgcttcttcgtgcagctcgtcggcgtcgaggaaggcttgcaggcgg                                                          >  1:169580‑M2/1‑43 (MQ=255)
                                                                                                           cGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTgg                                          >  5:186571/1‑149 (MQ=255)
                                                                                                               ctTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGgatcgaaagagcggtgaggtagccgtgtgcggcgacatagtccagcgcttcttcgtgcagctcgtcggcgtcgaggaaggcttgcaggcgggtcagttgctcggcgaagga                                      <  5:385069‑M2/149‑112 (MQ=255)
                                                                                                                tttCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGc                                                     <  6:307320/133‑1 (MQ=255)
                                                                                                                tttCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGc                                                     >  5:307320/1‑133 (MQ=255)
                                                                                                                tttCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCa                                       <  2:170840/147‑1 (MQ=255)
                                                                                                                tttCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGc                                     >  1:215011/1‑149 (MQ=255)
                                                                                                                tttCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGc                                     >  8:188954/1‑149 (MQ=255)
                                                                                                                    gATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGcgac                                  <  2:359247/148‑1 (MQ=255)
                                                                                                                     aTCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCtgg                                                                           >  2:258842/1‑106 (MQ=255)
                                                                                                                     aTCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCtgg                                                                           <  1:258842/106‑1 (MQ=255)
                                                                                                                      tCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCATCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACgaa                               <  8:242110/149‑1 (MQ=255)
                                                                                                                        accgccgcGGACTGGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACgaa                               <  8:165909/145‑1 (MQ=255)
                                                                                                                           gCCGAGGACGTGCCCGAGCGCGAATGGATCGCCGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAAtt                          >  5:39699/1‑149 (MQ=255)
                                                                                                                              gAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGa                       <  7:341656/149‑1 (MQ=255)
                                                                                                                               aGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAc                      <  5:313273/149‑1 (MQ=255)
                                                                                                                               aGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAc                      <  4:164321/149‑1 (MQ=255)
                                                                                                                                ggACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAcc                     <  4:220715/149‑1 (MQ=255)
                                                                                                                                      gCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACgaa                               >  7:336789/1‑133 (MQ=255)
                                                                                                                                      gCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACgaa                               <  8:336789/133‑1 (MQ=255)
                                                                                                                                      gCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAcctgccct               >  3:262266/1‑149 (MQ=255)
                                                                                                                                       cccGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGc                                         >  2:37250/1‑122 (MQ=255)
                                                                                                                                       cccGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACgaa                               >  2:197948/1‑132 (MQ=255)
                                                                                                                                        ccGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAcctgccctgc             <  4:223892/149‑1 (MQ=255)
                                                                                                                                        ccGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGAcctgccctgc             <  8:325409/149‑1 (MQ=255)
                                                                                                                                           aGCGCGAATGgatcgaaagagcggtgaggtagccgtgtgcggcgacatagtccagcgcttcttcgtgcagctcgtcggcgtcgaggaaggcttgcaggcgggtcagttgctcggcgaaggacattacagggctaccttggggaataaac          >  6:385069‑M2/1‑10 (MQ=255)
                                                                                                                                              gcgAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctc       >  6:134386/1‑149 (MQ=255)
                                                                                                                                                gAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctcga     <  6:39699/149‑1 (MQ=255)
                                                                                                                                                 aaTGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctcgac    <  5:134386/149‑1 (MQ=255)
                                                                                                                                                   tGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctcgacct  <  7:283964/149‑1 (MQ=255)
                                                                                                                                                   tGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctcgacc   >  4:333781/1‑148 (MQ=255)
                                                                                                                                                   tGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGcgacctcgacc   <  3:333781/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCTGTAATGTCCTTCGCCGAGCAACTGACCCGCCTGCAAGCCTTCCTCGACGCCGACGAGCTGCACGAAGAAGCGCTGGACTATGTCGCCGCACACGGCTACCTCACCGCTCTTTCGATCAACGCCGAGGACGTGCCCGAGCGCGAATGGATCGACGCCCTGTTCGCCGAGGAGCCGCACTACGCCAGCGAAGCCCAGCGCACCGAGATCGAGGCCACCCTGGTGGCGCTCAAGGCACACATTGCCCGCCAGCTGGCCAGCGACGAAGAATTCGACCTGCCCTGCGACCTCGACCT  >  NC_002947/5131641‑5131936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.