| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5189221 = | 66 (1.030) | 5 (0.080) | 5/246 | NT | 7.8% | coding (85/294 nt) | PP_4569 | hypothetical protein |
| ? | NC_002947 | 5189309 = | 55 (0.890) | intergenic (‑4/+21) | PP_4569/PP_4570 | hypothetical protein/hypothetical protein | |||||
GCGGTGGTGGTGGCGTATCTGTTGTATCGCTGGTTGTTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5189371‑5189221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaTGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGC > NC_002947/5189309‑5189454 GCGGTGGTGGTGGCGTATCTGTTGTATCGCTGGTTGTTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGA < 4:227351/148‑1GCGGTGGTGGTGGCGTATCTGTTGTATCGCTGGTTGTTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGA < 5:173568/148‑1 TTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAA < 3:248694/113‑1 TTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAA > 4:248694/1‑113 TTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAA > 1:57878/1‑104 TTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAA < 2:57878/104‑1 TCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACG > 6:80714/1‑149 CGGCATCTTTGCGGGGCAAGCCAGCTGCCACAGCTGCGGCTGATCCTTAAAGGACGAGTGCGCGCGCGTCGAAGCGGGGTTGTGCTGCGAAGATGCCGGTAAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCAACCA > 6:357479/1‑149 CATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCA > 2:361398/1‑149 TTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCAAAGCTGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATCCGCCCCCACCACCGC > 7:205622/1‑149 GACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTT < 5:80714/149‑1 AAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGC < 3:149101/144‑1 AAGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGC > 4:149101/1‑144 AGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGC < 8:249489/149‑1 AGATGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGC < 8:81194/149‑1 GCGGTGGTGGTGGCGTATCTGTTGTATCGCTGGTTGTTCTGATTTTTTCTGGTCTAACCGGCATCTTTGCGGGGCAAGCCCGCTGCCACAGGTGCGGCTGATCCTTCAAGGACGAGGGCGCGCGCGTGGAAGCGGGGTTGTGCTGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5189371‑5189221‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaTGCCGGTTAGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGC > NC_002947/5189309‑5189454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |