New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5189221 =	66 (1.030)	5 (0.080)	5/246	NT	7.8%	coding (85/294 nt)	PP_4569	hypothetical protein
	?	NC_002947	5189309 =	55 (0.890)					intergenic (‑4/+21)	PP_4569/PP_4570	hypothetical protein/hypothetical protein

GGATGGCGGGCATGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGCGCT  >  NC_002947/5189161‑5189457                                                                                                                                                     |                                                                                                                                                      ggATGGCGGGCATGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGAt                                                                                                                                                       <  7:236501/149‑1 (MQ=255)  tggtggtggcgtatctgttgtatcgctggttgttctgattttttctggtctaaccggcaTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATg                                                                                                                                                      >  2:361398‑M1/60‑149 (MQ=255)     tggttgcgtatctgttgtatcgctggttgttctgattttttctggtcttaccggcaTCTTCGCAGCACAACCCCGCTTCGACGCGCGCGCACTCGTCCTTTAAGGATCAGCCGCAGCTGTGGCAGCTGGCTTGCCCCGCAAAGATGCCg                                                                                                                                                   >  6:357479‑M1/57‑149 (MQ=255)      gCGGGCATGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCg                                                                                                                                                   <  4:353526/148‑1 (MQ=255)        gggCATGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGtt                                                                                                                                                <  1:22617/149‑1 (MQ=255)           cgtatctgttgtatcgctggttgttctgattttttctggtctaaccggcaTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGa                                                                                                                                            >  6:80714‑M1/51‑149 (MQ=255)            aTGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGAc                                                                                                                                           >  8:66114/1‑149 (MQ=255)            aTGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGAc                                                                                                                                           <  7:66114/149‑1 (MQ=255)            aTGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGAc                                                                                                                                           >  4:107476/1‑149 (MQ=255)            aTGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGAc                                                                                                                                           <  6:371121/149‑1 (MQ=255)              gACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGAc                                                                                                                                           >  4:151850/1‑147 (MQ=255)                 aGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGa                                                                                                                                       >  3:40617/1‑148 (MQ=255)                          tGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATc                                                                                                                                <  2:393442/146‑1 (MQ=255)                          tGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCACACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCa                                                                                                                               <  7:218911/147‑1 (MQ=255)                           gCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaa                                                                                                                            >  8:77080/1‑149 (MQ=255)                            cAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaa                                                                                                                            <  3:107476/148‑1 (MQ=255)                                 gTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCa                                                                                                                      >  3:297806/1‑149 (MQ=255)                                   gAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAg                                                                                                                     <  4:40617/148‑1 (MQ=255)                                    aaTGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGc                                                                                                                    <  4:297806/148‑1 (MQ=255)                                      tGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATGAGAACAACCAGCGAt                                                                                                                 <  3:151850/149‑1 (MQ=255)                                          cTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATacaa                                                                                                             >  5:311588/1‑149 (MQ=255)                                             gAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCgg                                                                                                                                                  <  5:66241/110‑1 (MQ=255)                                             gAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCgg                                                                                                                                                  >  6:66241/1‑110 (MQ=255)                                             gAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑a                                                                                                                                              <  5:335983/113‑1 (MQ=255)                                             gAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑a                                                                                                                                              >  6:335983/1‑113 (MQ=255)                                                  tctaaccggcatctttgcggggcaagcccgctgccacaggtgcggctgatccttcaaggacgagggcgcgcgcgtggaagcggggttgtgctgcgaagaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACg                                                                                                     >  6:80714‑M2/100‑149 (MQ=255)                                                  taGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATAc                                                                                                      <  5:265098/148‑1 (MQ=255)                                                   aGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCACCTATACAACAGATACga                                                                                                    >  4:206588/1‑148 (MQ=255)                                                    gCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAg                                                                                                          <  6:106971/142‑1 (MQ=255)                                                    gCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAg                                                                                                          >  5:106971/1‑142 (MQ=255)                                                        cggcatctttgcggggcaagccagctgccacagctgcggctgatccttaaaggacgagtgcgcgcgcgtcgaagcggggttgtgctgcgaagaTGCCGGTA‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGcaacca                                                                                               >  6:357479‑M2/94‑149 (MQ=255)                                                           catctttgcggggcaagcccgctgccacaggtgcggctgatccttcaaggacgagggcgcgcgcgtggaagcggggttgtgctgcgaagaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGccaccacca                                                                                            >  2:361398‑M2/91‑149 (MQ=255)                                                            ttcttcGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCcaccaccac                                                                                           >  5:12043/1‑149 (MQ=255)                                                               tttgcggggcaagcccgctgccacaggtgcggctgatccttcaaggacgagggcgcgcgcgtggaagcggggttgtgctgcaaagcTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATCCGCCCCCACCACCGc                                                                                        >  7:205622‑M2/87‑149 (MQ=255)                                                               TTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGaaa                                                                                                                                     >  1:57878‑M1/1‑104 (MQ=255)                                                               TTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGaaa                                                                                                                                     <  2:57878‑M1/104‑1 (MQ=255)                                                               TTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaa                                                                                                                            >  4:248694‑M1/1‑113 (MQ=255)                                                               TTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaa                                                                                                                            <  3:248694‑M1/113‑1 (MQ=255)                                                                TCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGc                                                                                        <  4:227351‑M1/148‑1 (MQ=255)                                                                TCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGc                                                                                        <  5:173568‑M1/148‑1 (MQ=255)                                                                  gcagcaCAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAg                                                                                     >  8:91859/1‑149 (MQ=255)                                                                       acaACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaac                                                                                                                           >  5:316521/1‑106 (MQ=255)                                                                       acaACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGaac                                                                                                                           <  6:316521/106‑1 (MQ=255)                                                                       acaACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGcc                                                                                                   >  4:231290/1‑130 (MQ=255)                                                                       acaACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGcc                                                                                                   <  3:231290/130‑1 (MQ=255)                                                                           ccccGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCg                                                                            <  4:47920/149‑1 (MQ=255)                                                                                    cACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCAcgcg                                                                   >  4:321110/1‑149 (MQ=255)                                                                                     aCGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACACCCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCgg                                                                  >  5:67945/1‑149 (MQ=255)                                                                                       gcgcgcgcCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCg                                                                                                                                                   <  6:294908/67‑1 (MQ=255)                                                                                       gcgcgcgcCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCg                                                                                                                                                   >  5:294908/1‑67 (MQ=255)                                                                                       gcgcgcgcCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGt                                                                 >  6:371486/1‑148 (MQ=255)                                                                                           gcgcCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGcc                                                            >  7:142907/1‑149 (MQ=255)                                                                                                 tCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTgggg                                                      >  4:191621/1‑149 (MQ=255)                                                                                                  cGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGc                                                                                        >  5:66761/1‑114 (MQ=255)                                                                                                  cGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGc                                                                                        <  6:66761/114‑1 (MQ=255)                                                                                                   gTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGtt                                                    <  6:67945/149‑1 (MQ=255)                                                                                                     ccTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTgg                                                  >  6:358398/1‑149 (MQ=255)                                                                                                        tGAAGGATCAGACGCACCTGTGGCAGCGTGCTTGCCCAGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTg                                                         <  4:229855/139‑1 (MQ=255)                                                                                                            ggATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGttt                                           >  7:81194/1‑149 (MQ=255)                                                                                                            gacgagggcgcgcgcgtggaagcggggttgtgctgcgaagaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGttt                                           <  5:80714‑M2/108‑1 (MQ=255)                                                                                                             gATCATCCTCACATGTGTCAGCGGGCTTGCCACGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATTCGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGttt                                           <  3:206588/148‑1 (MQ=255)                                                                                                                    cGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCt                                   <  3:321110/149‑1 (MQ=255)                                                                                                                      cACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTc                                 <  5:358398/149‑1 (MQ=255)                                                                                                                         cTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGaa                                        <  5:32028/139‑1 (MQ=255)                                                                                                                         cTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGaa                                        >  6:32028/1‑139 (MQ=255)                                                                                                                         cTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTcaca                              >  4:282384/1‑149 (MQ=255)                                                                                                                          tgtgGCAGCGGGCTTGCCCCGCAAAGATGCCGGTTAAGACCCGAAAAAAGCAGACCACCCCGCGATACACCAGATACGCCCCCCCCACCGCCAGTCCCGGCCGCAGCAGGCGGTATGCGTGGGGGTTGGCACGTTTGAAGTGGTTcc                                >  1:273953/1‑146 (MQ=255)                                                                                                                                aGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGgctgc                       >  7:249489/1‑149 (MQ=255)                                                                                                                                     gCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATc                  <  3:191621/149‑1 (MQ=255)                                                                                                                                      cTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATcc                 >  8:231324/1‑149 (MQ=255)                                                                                                                                          ccccGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGtt             <  5:371486/149‑1 (MQ=255)                                                                                                                                          ccccGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGtt             <  7:91859/149‑1 (MQ=255)                                                                                                                                          ccccGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGtt             <  8:142907/149‑1 (MQ=255)                                                                                                                                             cGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAATAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTg            >  7:300374/1‑147 (MQ=255)                                                                                                                                             cGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAATAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTg            <  8:300374/147‑1 (MQ=255)                                                                                                                                                 aagaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGc           >  4:149101‑M2/5‑144 (MQ=255)                                                                                                                                                 aagaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGc           <  3:149101‑M2/140‑1 (MQ=255)                                                                                                                                                  agaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAgc     <  8:249489‑M2/146‑1 (MQ=255)                                                                                                                                                  agaTGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAgc     <  8:81194‑M2/146‑1 (MQ=255)                                                                                                                                                     tGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGCGCt  <  3:282384/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GGATGGCGGGCATGACAGGGGTCTTTGCAGAAGTGAATGTTCTGGAATATAGCGAGTGATTCTTCGCAGCACAACCCCGCTTCCACGCGCGCGCCCTCGTCCTTGAAGGATCAGCCGCACCTGTGGCAGCGGGCTTGCCCCGCAAAGATGCCGGTT‑AGACCAGAAAAAATCAGAACAACCAGCGATACAACAGATACGCCACCACCACCGCCAGTACCGGCCGCAGCACGCGGTAAGCCTTGGGGTTGGCACGTTTGAACTGCTTCACATGGCTGCTGATCCTGTTGCTGAAGCGCT  >  NC_002947/5189161‑5189457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.