New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5227143 =	58 (0.910)	3 (0.050)	3/242	NT	5.3%	coding (1916/2391 nt)	PP_4606	ferric siderophore receptor
	?	NC_002947	5227175 =	52 (0.850)					coding (1884/2391 nt)	PP_4606	ferric siderophore receptor

TGCTCGACTCCTCGGTGGCACCTGAGGAGGGCAAGGCGTGGGAGCTGGGCGCCAAGCTCGACATGCCAGGCCGCATCACAGGCACCCTGGCATTGTTCGATATCACCAAGCGCAATGTACTGGTCTCGAACTTTGACGCCGTCACAAGCGAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5227296‑5227143 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATG  >  NC_002947/5227175‑5227322                                                                                                                                                                                                                                                                                                                TGCTCGACTCCTCGGTGGCACCTGAGGAGGGCAAGGCGTGGGAGCTGGGCGCCAAGCTCGACATGCCAGGCCGCATCACAGGCACCCTGGCATTGTTCGATATCACCAAGCGCAATGTACTGGTCTCGAACTTTGACGCCGTCACAAGC                                                                                                                                                           <  7:336202/149‑1    TCGACTCCTCGGTGGCACCTGAGGAGGGCAAGGCGTGGGAGCTGGGCGCCAAGCTCGACATGCCAGGCCGCATCACAGGCACCCTGGCATTGTTCGATATCACCAAGCGCAATGTACTGGTCTCGAACTTTGACGCCGTCACAAGC                                                                                                                                                           >  4:178209/1‑146    TCGACTCCTCGGTGGCACCTGAGGAGGGCAAGGCGTGGGAGCTGGGCGCCAAGCTCGACATGCCAGGCCGCATCACAGGCACCCTGGCATTGTTCGATATCACCAAGCGCAATGTACTGGTCTCGAACTTTGACGCCGTCACAAGC                                                                                                                                                           >  8:112946/1‑146                                                                                                                  AATGTACTGGTCTCGAACTTTGACGCCGTCACAAGCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCAC                                          >  6:206478/1‑149                                                                                                                      TACTGGTCTCGAACTTTGACGCCGTCACAAGCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTG                                              <  7:215325/141‑1                                                                                                                      TACTGGTCTCGAACTTTGACGCCGTCACAAGCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTG                                              >  8:215325/1‑141                                                                                                                                                     CGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCT                                                       <  1:165128/101‑1                                                                                                                                                     CGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCT                                                       >  2:165128/1‑101                                                                                                                                                      GAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGC      >  4:408405/1‑149                                                                                                                                                          CCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATG  <  6:321088/149‑1                                                                                                                                                                                                                                                                                                                TGCTCGACTCCTCGGTGGCACCTGAGGAGGGCAAGGCGTGGGAGCTGGGCGCCAAGCTCGACATGCCAGGCCGCATCACAGGCACCCTGGCATTGTTCGATATCACCAAGCGCAATGTACTGGTCTCGAACTTTGACGCCGTCACAAGCGAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5227296‑5227143 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATG  >  NC_002947/5227175‑5227322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.