New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5227143 =58 (0.910)3 (0.050) 3/242 NT 5.3% coding (1916/2391 nt) PP_4606 ferric siderophore receptor
?NC_002947 5227175 = 52 (0.850)coding (1884/2391 nt) PP_4606 ferric siderophore receptor

GCATCGGTCAGTGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATGG  >  NC_002947/5227035‑5227323
                                                                                                                                            |                                                                                                                                                     
gtggcacctgaggagggcaaggcgtgggagctgggcgccaagctcgacatgccaggccgcatcacaggcaccctggcattgttcgatatcaccaagcgcaatgtactgGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACAtt                                                                                                                                               >  6:206478‑M1/109‑149 (MQ=255)
    cacctgaggagggcaaggcgtgggagctgggcgccaagctcgacatgccaggccgcatcacaggcaccctggcattgttcgatatcaccaagcgcaatgtactgGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTa                                                                                                                                                   >  8:215325‑M1/105‑141 (MQ=255)
    cacctgaggagggcaaggcgtgggagctgggcgccaagctcgacatgccaggccgcatcacaggcaccctggcattgttcgatatcaccaagcgcaatgtactgGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTa                                                                                                                                                   <  7:215325‑M1/37‑1 (MQ=255)
     ggTCAGTGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCt                                                                                                                                          >  6:68818/1‑149 (MQ=255)
       tCAGTGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTg                                                                                                                                        >  4:316971/1‑149 (MQ=255)
         aGTGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTgg                                                                                                                                       <  2:115753/148‑1 (MQ=255)
           tGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGa                                                                                                                                    >  7:390464/1‑149 (MQ=255)
           tGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGa                                                                                                                                    <  6:232749/149‑1 (MQ=255)
              aTAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGatat                                                                                                                                >  1:338627/1‑149 (MQ=255)
                aGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATc                                                                                                                               >  2:150211/1‑148 (MQ=255)
                    gCCGATCACCCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTCAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAACTTCGAGACCGGTACAAAGCCCTTGGTGATATCGAAc                                                                                                                           >  8:365725/1‑148 (MQ=255)
                      cGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAAt                                                                                                                        <  4:230123/149‑1 (MQ=255)
                       gATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATg                                                                                                                       >  4:243213/1‑149 (MQ=255)
                        aTCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGc                                                                                                                      >  3:60866/1‑149 (MQ=255)
                        aTCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGc                                                                                                                      <  3:316971/149‑1 (MQ=255)
                            ggCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGatat                                                                                                                                <  6:271214/135‑1 (MQ=255)
                            ggCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGatat                                                                                                                                >  5:271214/1‑135 (MQ=255)
                            ggCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAgg                                                                                                                  >  8:352823/1‑149 (MQ=255)
                                   gcgcTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACAGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCtg                                                                                                           <  1:150211/149‑1 (MQ=255)
                                         gctGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGAt                                                                                                       <  4:60866/147‑1 (MQ=255)
                                         gctGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGc                                                                                                     >  3:337198/1‑149 (MQ=255)
                                                tGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCtcg                                                                                              >  5:364294/1‑147 (MQ=255)
                                                  gCCGGTCACGTCGAGTTCCACAGCGCGGGAACTGACCTGACCCGCATTGCTGTAGACCGTCTCGCTTGGGACGGCGTCAAAGTTCGAGACCTGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTgg                                                                                              <  7:365725/147‑1 (MQ=255)
                                                   ccGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCAt                                                                                           <  2:338627/149‑1 (MQ=255)
                                                    cGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATg                                                                                          >  4:81008/1‑149 (MQ=255)
                                                         aCGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTg                                                                                               >  7:327643/1‑139 (MQ=255)
                                                         aCGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTg                                                                                               <  8:327643/139‑1 (MQ=255)
                                                           gTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCt                                                                                   >  2:56333/1‑149 (MQ=255)
                                                             cGAGGTCCACCCCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTg                                                                                 <  8:289331/149‑1 (MQ=255)
                                                              gAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTgg                                                                                <  3:81008/149‑1 (MQ=255)
                                                                gTTCCACACCGCGTGAACTGACCTCACCCACATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGgcg                                                                              <  6:277743/149‑1 (MQ=255)
                                                                       acCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCa                                                                                                                                                      <  1:164261/71‑1 (MQ=255)
                                                                       acCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCa                                                                                                                                                      >  2:164261/1‑71 (MQ=255)
                                                                           cgTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCa                                                                   >  8:299752/1‑149 (MQ=255)
                                                                            gTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCAc                                                                  <  2:413333/149‑1 (MQ=255)
                                                                                    aCCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGcc                                                               <  2:413285/144‑1 (MQ=255)
                                                                                    aCCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGcc                                                               >  1:413285/1‑144 (MQ=255)
                                                                                     ccTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGc                                                                                             >  3:250487/1‑113 (MQ=255)
                                                                                     ccTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGc                                                                                             <  4:250487/113‑1 (MQ=255)
                                                                                         aCCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCcctcct                                                     >  7:312011/1‑149 (MQ=255)
                                                                                         aCCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCcctcct                                                     >  6:211312/1‑149 (MQ=255)
                                                                                           ccGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCcctcct                                                     >  5:321088/1‑147 (MQ=255)
                                                                                                   aatgtactggtctcgaactttgacgccgtcacaagcgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCAc                                           >  6:206478‑M2/42‑149 (MQ=255)
                                                                                                    tGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCAcc                                          >  7:112946/1‑149 (MQ=255)
                                                                                                      tAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCAcc                                          <  5:211312/147‑1 (MQ=255)
                                                                                                      tAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCga                                        <  7:352823/149‑1 (MQ=255)
                                                                                                       tactggtctcgaactttgacgccgtcacaagcgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTg                                               >  8:215325‑M2/38‑141 (MQ=255)
                                                                                                       tactggtctcgaactttgacgccgtcacaagcgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTg                                               <  7:215325‑M2/104‑1 (MQ=255)
                                                                                                        gACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCgag                                       <  4:337198/148‑1 (MQ=255)
                                                                                                         aCCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAg                                                                                     >  5:60720/1‑101 (MQ=255)
                                                                                                         aCCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAg                                                                                     <  6:60720/101‑1 (MQ=255)
                                                                                                           cGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGc                                                                                                     >  6:196198/1‑83 (MQ=255)
                                                                                                           cGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGc                                                                                                     <  5:196198/83‑1 (MQ=255)
                                                                                                                 GCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGa                                >  4:178209‑M1/1‑146 (MQ=255)
                                                                                                                 GCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGa                                >  8:112946‑M1/1‑146 (MQ=255)
                                                                                                                 GCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCa                             <  7:336202‑M1/149‑1 (MQ=255)
                                                                                                                       gACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGa                                >  8:296449/1‑140 (MQ=255)
                                                                                                                       gACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGa                                <  7:296449/140‑1 (MQ=255)
                                                                                                                             gTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCgg                 >  4:242318/1‑149 (MQ=255)
                                                                                                                              tCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGt                <  8:312011/149‑1 (MQ=255)
                                                                                                                                aaaGTTCGAGACCAGTACATTGCGCTTGGTGATATCGATCAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGt                >  5:212316/1‑147 (MQ=255)
                                                                                                                                aaaGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGt                >  7:175192/1‑147 (MQ=255)
                                                                                                                                aaaGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGt                >  7:336828/1‑147 (MQ=255)
                                                                                                                                 aaGTTCGAGACCAGTACATTGCGCTTGGTGATTATCGAACAATGCCAGGTTGCCTGTTATGCGGCATGGAATTTCGAGATTGGCGCCAAGCTCCAACGCCTTGCCATCATAAGGTGCCACCGAGGATTCGAGCACGACATTGCCgta                >  1:249904/1‑145 (MQ=255)
                                                                                                                                    ttCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTg                     >  3:376745/1‑138 (MQ=255)
                                                                                                                                    ttCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTg                     <  4:382817/138‑1 (MQ=255)
                                                                                                                                    ttCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTg                     <  4:376745/138‑1 (MQ=255)
                                                                                                                                    ttCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTg                     >  3:382817/1‑138 (MQ=255)
                                                                                                                                     tCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAgcggc         >  1:245749/1‑149 (MQ=255)
                                                                                                                                      cgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCcct                                                        <  1:165128‑M2/95‑1 (MQ=255)
                                                                                                                                      cgagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCcct                                                        >  2:165128‑M2/7‑101 (MQ=255)
                                                                                                                                       gagacCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGgcgc       >  4:408405‑M2/6‑149 (MQ=255)
                                                                                                                                           cCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATg   <  6:321088‑M2/148‑1 (MQ=255)
                                                                                                                                            cAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATgg  >  7:271574/1‑149 (MQ=255)
                                                                                                                                            |                                                                                                                                                     
GCATCGGTCAGTGCATAGCTGCCGATCAGGCTCCAGCGCTCGCTGAGCTGGCCGGTCACGTCGAGTTCCACACCGCGTGAACTGACCTCACCCGCATTGCTGTAGACCGTCTCGCTTGTGACGGCGTCAAAGTTCGAGACCAGTACATTGCGCTTGGTGATATCGAACAATGCCAGGGTGCCTGTGATGCGGCCTGGCATGTCGAGCTTGGCGCCCAGCTCCCACGCCTTGCCCTCCTCAGGTGCCACCGAGGAGTCGAGCACGACATTGCCGGTCAGCGGCGCGATGG  >  NC_002947/5227035‑5227323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.