| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5235967 = | 71 (1.110) | 4 (0.070) | 4/242 | NT | 6.5% | coding (1301/2325 nt) | fecA | outer membrane ferric citrate porin |
| ? | NC_002947 | 5236068 = | 48 (0.790) | coding (1402/2325 nt) | fecA | outer membrane ferric citrate porin | |||||
CCAGGTAGATGGCATGGGCTTCGGTGCTGCCACGGGTGTCGCGGTCGTTGCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5236119‑5235967‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATC > NC_002947/5236068‑5236178 CCAGGTAGATGGCATGGGCTTCGGTGCTGCCACGGGTGTCGCGGTCGTTGCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGC > 6:400108/1‑149 CAGGTAGATGGCATGGGCTTCGGTGCTGCCACGGGTGTCGCGCTCGTTGCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCAAGCTCGTGC > 7:364000/1‑148 GTAGATGGCATGGGCTTCGGTGCTGCCACGGGTGTCGCGGTCGTTGCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGC > 4:228944/1‑149 GCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATC > 6:133013/1‑149 GGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTA > 8:267921/1‑149 GCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGG < 7:267921/149‑1 GTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATC < 5:133013/149‑1 CCAGGTAGATGGCATGGGCTTCGGTGCTGCCACGGGTGTCGCGGTCGTTGCGGCTGGCGGTGGTGGGCAGGCTGCCGTTCACCGGCTCGCGGAAGCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5236119‑5235967‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATC > NC_002947/5236068‑5236178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |