New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5235967 = | 71 (1.110) | 4 (0.070) | 4/242 | NT | 6.5% | coding (1301/2325 nt) | fecA | outer membrane ferric citrate porin |
? | NC_002947 | 5236068 = | 48 (0.790) | coding (1402/2325 nt) | fecA | outer membrane ferric citrate porin |
GCGCGGCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCGAGCAGAGCAACAAGCTCAACG > NC_002947/5235920‑5236206 | tagatggcatgggcttcggtgctgccacgggtgtcgcggtcgttgcgGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGcc > 8:267921‑M1/48‑149 (MQ=255) gcgcGGCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGcc > 4:337925/1‑149 (MQ=255) gatggcatgggcttcggtgctgccacgggtgtcgcggtcgttgcgGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGc > 6:133013‑M1/46‑149 (MQ=255) cgGCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGCGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGc > 4:246666/1‑148 (MQ=255) ggCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCaa < 1:236747/149‑1 (MQ=255) ggCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCaa < 4:138077/149‑1 (MQ=255) gAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACcg > 8:20271/1‑149 (MQ=255) aaaCCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACcgc < 4:381649/149‑1 (MQ=255) aaaCCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACcgc < 7:129561/149‑1 (MQ=255) ccGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACCGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGaca > 4:199305/1‑149 (MQ=255) cGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGacac > 5:400108/1‑149 (MQ=255) ctcGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTg > 4:145792/1‑149 (MQ=255) tcGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGAACCCCGTgg > 8:364000/1‑149 (MQ=255) gCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTgg > 3:228944/1‑147 (MQ=255) aGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGgcagc < 5:385146/149‑1 (MQ=255) ggCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCAc < 6:81176/149‑1 (MQ=255) cGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCg < 3:145792/149‑1 (MQ=255) ggTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGc > 2:377204/1‑149 (MQ=255) gcggctggcggtggtgggcaggctgccgttcaccggctcgcggaagcgcagttcgtggccggcttcgttgacgtagcggtagccgatgcccagctcgtgccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATc > 6:133013‑M2/105‑149 (MQ=255) aCAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATc < 5:292165/149‑1 (MQ=255) ggctggcggtggtgggcaggctgccgttcaccggctcgcggaagcgcagttcgtggccggcttcgttgacgtagcggtagccgatgcccagctcgtgccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTa > 8:267921‑M2/103‑149 (MQ=255) GCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTAc > 4:228944‑M1/1‑149 (MQ=255) gcggtggtgggcaggctgccgttcaccggctcgcggaagcgcagttcgtggccggcttcgttgacgtagcggtagccgatgcccagctcgtgccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTgg < 7:267921‑M2/52‑1 (MQ=255) GCACGAGCTTGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGAGCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTg > 7:364000‑M1/1‑148 (MQ=255) GCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTgg > 6:400108‑M1/1‑149 (MQ=255) aCGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGAt > 8:38378/1‑149 (MQ=255) ggCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCAt < 3:202817/149‑1 (MQ=255) tCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGa > 5:148967/1‑148 (MQ=255) cTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCg > 2:358945/1‑149 (MQ=255) tACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCgg > 1:191745/1‑149 (MQ=255) cGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGa > 7:310839/1‑140 (MQ=255) agCTAAGTCAAAGAATCCGGCAACTAACTGCGCTTCCGCGAGCCGTTGAACGGAAGCCTGCACACCAGCGCCAGCCGCAACTACCGCGACACCCGTGGCAGCAGCTAAGCCCATGCCATCTACCTGGATGACCGCATCGa < 8:310839/139‑1 (MQ=255) cGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGa < 1:358945/149‑1 (MQ=255) cGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGa < 3:199305/149‑1 (MQ=255) cGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGa < 7:38378/149‑1 (MQ=255) gTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGCAc > 4:320841/1‑149 (MQ=255) cGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCa < 1:377204/149‑1 (MQ=255) gAAGCCGGCCACGAACTGGGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCAc < 1:373548/149‑1 (MQ=255) aaGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATc > 5:15988/1‑125 (MQ=255) aaGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATc < 6:15988/125‑1 (MQ=255) aaGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCAcc < 7:20271/149‑1 (MQ=255) ccACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCg > 2:317656/1‑149 (MQ=255) aCTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTgcgc > 8:218648/1‑148 (MQ=255) gcgcTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCg > 1:411388/1‑110 (MQ=255) gcgcTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCg < 2:411388/110‑1 (MQ=255) cgcTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACga < 3:320841/149‑1 (MQ=255) gcTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGAcc < 6:58513/102‑1 (MQ=255) gcTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGAcc > 5:58513/1‑102 (MQ=255) cgcgAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAgatgat > 3:212697/1‑149 (MQ=255) cgcgAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAgatgat > 8:234736/1‑149 (MQ=255) gttgacgtagcggtagccgatgcccagctcgtgccagcCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATc < 5:133013‑M2/111‑1 (MQ=255) gcgAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATc < 5:347770/149‑1 (MQ=255) gcgAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATc < 7:218648/149‑1 (MQ=255) cGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTcc < 3:337925/149‑1 (MQ=255) aCGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCgagca < 2:191745/148‑1 (MQ=255) aCGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCgag > 6:355901/1‑146 (MQ=255) cGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCAcccc < 1:319168/114‑1 (MQ=255) cGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCAcccc > 2:319168/1‑114 (MQ=255) gCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCgagcagagc < 4:212697/149‑1 (MQ=255) gCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCGAGCAGAGCAACAAg > 7:83298/1‑148 (MQ=255) accaccGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCGAGCAGAGCAACAAGCTCaa > 1:254153/1‑149 (MQ=255) aacaccGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGACATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGAACGACTCCGAGCAGAGCAACAAGCTCaa > 2:139329/3‑149 (MQ=255) caccGCAAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACAGCATCGAAATCGGCCGCTGCACCAACACCCCGGGCGTGCGCTACGAGATGATCGACTCCGAGCAGAGCAACAAGCTCAACg > 1:363718/1‑149 (MQ=255) | GCGCGGCATCGAAACCCGCTTCTCGCAGGGCGTGGCCCTGGGTGACAGCTGGCACGAGCTGGGCATCGGCTACCGCTACGTCAACGAAGCCGGCCACGAACTGCGCTTCCGCGAGCCGGTGAACGGCAGCCTGCCCACCACCGCCAGCCGCAACGACCGCGACACCCGTGGCAGCACCGAAGCCCATGCCATCTACCTGGATGACCGCATCGACATCGGCCGCTGGACCATCACCCCGGGCGTGCGCTACGAGATGATCGACTCCGAGCAGAGCAACAAGCTCAACG > NC_002947/5235920‑5236206 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |