New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5303678	56 (0.880)	3 (0.050)	3/238	NT	5.4%	coding (95/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
	?	NC_002947	= 5303702	52 (0.870)					coding (71/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease

CTTGCGGCTTCAGCCAGGCGGGCGCGGATACGCTCGCGCAGCTCTTTGGTGGCGGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5303525‑5303678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccgGTACGGGCAAGACCTTCACCATTTCGGCGCTGTACCTGCGCCTGATCCTCGGTCACGGTGGCGAACAGGGCTTCGAACGCGAGCTGCTGCCACCGCAGATCCTCGTGGTGACCTTCACCGACGCCGCCACCAAAGAGCTGC  <  NC_002947/5303702‑5303562                                                                                                                                                                                                                                                                                                         CTTGCGGCTTCAGCCAGGCGGGCGCGGATACGCTCGCGCAGCTCTTTGGTGGCGGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAG                                                                                                                                                    >  1:20248/1‑149  TTGCGGCTTCAGCCAGGCGGGCGCGGATACGCTCGCGCAGCTCTTTGGTGGAGGCGTCGGTGAAGGTCACCACCAGCATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGC                                                                                                                                                   >  1:367923/1‑149         TTCAGCCAGGCGGGCGCGGATACGCTCGCGCAGCTCTTTGGTGGCGGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCGGTA                                                                                                                                            >  2:139592/1‑149                                        AGCTCTTTGGTGGCGGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCGGTACGGGCAAGACCTTCACCATTTCGGCGCTGTA                                                                                                             <  1:139592/149‑1                                                      GGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCGGTACGGGCAAGACCTTCACCATTTCGGCGCTG                                                                                                               <  5:229553/133‑1                                                      GGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCGGTACGGGCAAGACCTTCACCATTTCGGCGCTG                                                                                                               >  6:229553/1‑133                                                                                                                                                   CAGCGCCGGTACGGGCAAGACCTTCACCATTTCGGCGCTGTACCTGCGCCTGATCCTCGGTCACGGTGGCGAACAGGGCTTCGAACGCGAGCTGCTGCCACCGCAGATCCTCGTGGTGACCTTCACCGACGCCGCCACCAAAGAGCTGC  >  2:233667/1‑149                                                                                                                                                                                                                                                                                                         CTTGCGGCTTCAGCCAGGCGGGCGCGGATACGCTCGCGCAGCTCTTTGGTGGCGGCGTCGGTGAAGGTCACCACGAGGATCTGCGGTGGCAGCAGCTCGCGTTCGAAGCCCTGTTCGCCACCGTGACCGAGGATCAGGCGCAGGTACAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5303525‑5303678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccgGTACGGGCAAGACCTTCACCATTTCGGCGCTGTACCTGCGCCTGATCCTCGGTCACGGTGGCGAACAGGGCTTCGAACGCGAGCTGCTGCCACCGCAGATCCTCGTGGTGACCTTCACCGACGCCGCCACCAAAGAGCTGC  <  NC_002947/5303702‑5303562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.