New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6028567	75 (1.170)	4 (0.070)	3/244	NT	5.8%	coding (894/1494 nt)	kauB	4‑guanidinobutyraldehyde dehydrogenase
	?	NC_002947	= 6028619	59 (0.960)					coding (842/1494 nt)	kauB	4‑guanidinobutyraldehyde dehydrogenase

CTGGGTATCGACCAAGGCACCGACAGTGGTCTGCGGGTCCAGCGGGTTGCCTGGCTTCCAGCCCTTCAGGGCCTCTACCACCATCGGCAGGAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6028417‑6028567 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTGG  <  NC_002947/6028619‑6028474                                                                                                                                                                                                                                                                                                           CTGGGTATCGACCAAGGCACCGACAGTGGTCTGCGGGTCCAGCGGGTTGCCTGGCTTCCAGCCCTTCAGGGCCTCTACCACCATCGGCAGGAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTC                                                                                                                                                        <  5:117233/147‑1                                                               CCTTCAGGGCCTCTACCACCATCGGCAGGAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAG                                                                                        <  2:216104/149‑1                                                               CCTTCAGGGCCTCTACCACCATCGGCAGGAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAG                                                                                        <  5:111513/149‑1                                                                                           GAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAA                                                                                         >  6:224188/1‑120                                                                                           GAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAA                                                                                         <  5:224188/120‑1                                                                                                                                                   CGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCT    >  1:384121/1‑149                                                                                                                                                   CGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTG                       <  1:267443/130‑1                                                                                                                                                   CGCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTG                       >  2:267443/1‑130                                                                                                                                                    GCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTG   <  8:352450/149‑1                                                                                                                                                    GCCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCAATGGTGGTAGAGGCCCTGAAGGGCTG   >  3:137600/1‑149                                                                                                                                                     CCCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTGG  <  3:31101/149‑1                                                                                                                                                      CCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTGG  >  8:356917/1‑148                                                                                                                                                      CCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTG                       <  1:164136/127‑1                                                                                                                                                      CCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCT                                 >  4:196379/1‑117                                                                                                                                                      CCCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCT                                 <  3:196379/117‑1                                                                                                                                                       CCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTGG  >  5:173227/1‑147                                                                                                                                                       CCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCC              <  7:373669/135‑1                                                                                                                                                       CCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCC              >  8:373669/1‑135                                                                                                                                                                                                                                                                                                           CTGGGTATCGACCAAGGCACCGACAGTGGTCTGCGGGTCCAGCGGGTTGCCTGGCTTCCAGCCCTTCAGGGCCTCTACCACCATCGGCAGGAACTTGTCCTTGATCGAACGCTCGACCAGCAGGCGGGAGCCTGCAGTGCACACTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6028417‑6028567 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCGGACCTGCAAGCAGCCGCCGAGGCCGCAGCCAGCGCCATCGCCTTCAACCAGGGCGAAGTGTGCACTGCAGGCTCCCGCCTGCTGGTCGAGCGTTCGATCAAGGACAAGTTCCTGCCGATGGTGGTAGAGGCCCTGAAGGGCTGG  <  NC_002947/6028619‑6028474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.