New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	341408 =	69 (1.080)	5 (0.080)	5/246	NT	7.4%	intergenic (‑302/‑76)	PP_5438/gabP‑I	hypothetical protein/gamma‑aminobutyrate permease
	?	NC_002947	341438 =	59 (0.950)					intergenic (‑332/‑46)	PP_5438/gabP‑I	hypothetical protein/gamma‑aminobutyrate permease

GTATTTCAGTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCTGTCCATCGCT  >  NC_002947/341260‑341555                                                                                                                                                     |                                                                                                                                                    gtctttCAGTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCa                                                                                                                                                     <  1:359259/146‑1 (MQ=255)   ctacgaacaggccggcaccgatgacgccagcgatggacagcatggtcacatgccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGc                                                                                                                                                   <  6:412913‑M1/3‑1 (MQ=255)    tttCAGTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGc                                                                                                                                                   <  4:186739/148‑1 (MQ=255)    tacgaacaggccggcaccgatgacgccagcgatggacagcatggtcacatgccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGCg                                                                                                                                                  <  3:191029‑M1/4‑1 (MQ=255)         gTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGcc                                                                                                                                             >  6:64484/1‑149 (MQ=255)         gTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGcc                                                                                                                                             <  5:138415/149‑1 (MQ=255)         gTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGcc                                                                                                                                             >  2:21160/1‑149 (MQ=255)            aTCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAg                                                                                                                                          >  1:375324/1‑149 (MQ=255)               cGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGt                                                                                                                                        >  4:215255/1‑148 (MQ=255)                     tttGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATccc                                                                                                                                  <  5:64484/148‑1 (MQ=255)                        gAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTAATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTg                                                                                                                               <  7:246453/148‑1 (MQ=255)                        gAGGTCCTTTCGGTCATGCAATGGCCGAAAGCAGTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGGATTCGTCATATGGCGCTCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTg                                                                                                                               <  4:101084/148‑1 (MQ=255)                         aGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAAGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGgc                                                                                                                             >  6:309137/1‑149 (MQ=255)                         aGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCAAGGCCGCATCCTAAAAGGACTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGgc                                                                                                                             >  6:144044/1‑149 (MQ=255)                            tCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGgcgcg                                                                                                                          <  2:375324/149‑1 (MQ=255)                            gccagcgatggacagcatggtcacatgccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGCGACGCCTAGGTCATCCCCTGgcgcg                                                                                                                          <  2:366441‑M1/28‑1 (MQ=255)                              cTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGct                                                                                                                        <  2:241898/149‑1 (MQ=255)                               tttCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGctc                                                                                                                       >  3:191539/1‑149 (MQ=255)                                    tggacagcatggtcacatgccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAc                                                                                                                  >  1:366441‑M1/114‑149 (MQ=255)                                    gTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCAATCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAc                                                                                                                  <  5:353511/149‑1 (MQ=255)                                     tCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAcc                                                                                                                 >  6:95316/1‑149 (MQ=255)                                     tCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAcc                                                                                                                 <  8:343120/149‑1 (MQ=255)                                       aTGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGgc                                                                                                                             >  8:148225/1‑135 (MQ=255)                                       aTGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGgc                                                                                                                             <  7:148225/135‑1 (MQ=255)                                           aaTGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGt                                                                                                           >  1:309228/1‑149 (MQ=255)                                           aaTGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGt                                                                                                           >  8:301637/1‑149 (MQ=255)                                               gCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGc                                                                                                       <  2:337401/149‑1 (MQ=255)                                               gCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGc                                                                                                       <  8:220075/149‑1 (MQ=255)                                                ccGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCg                                                                                                      >  5:192314/1‑149 (MQ=255)                                                    atgggcacatgccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgattgcAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGt                                                                                                  >  6:380030‑M1/98‑149 (MQ=255)                                                      gccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAccc                                                                                                                >  2:137086‑M1/96‑133 (MQ=255)                                                      gccgttgtttgagcccctgagcgaggtcattggaattgttaccgctcattgaaactacctttgtaaggagtggaccacgccgactgcgggtacagAGCGACGCCAAGGTCATCCCCTGGCGCGCTCTGTAccc                                                                                                                <  1:137086‑M1/38‑1 (MQ=255)                                                       cccTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCa                                                                                               >  8:283636/1‑149 (MQ=255)                                                        ccTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCACTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCAc                                                                                              >  2:299988/1‑149 (MQ=255)                                                            cAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTc                                                                                            <  2:309228/147‑1 (MQ=255)                                                             aGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCt                                                                                          >  5:285827/1‑148 (MQ=255)                                                             aGGCCGCATCCT‑AAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTa                                                                                        <  8:200470/149‑1 (MQ=255)                                                                       cTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTAGCCGGAGTCGGCGTGGTCCTCTCCTTACAAAGGTa                                                                                <  2:304949/148‑1 (MQ=255)                                                                         aaaaGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGtt                                                                             >  4:395249/1‑149 (MQ=255)                                                                          aaaGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAg                                                                                                                                          >  6:92629/1‑87 (MQ=255)                                                                          aaaGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAg                                                                                                                                          <  5:92629/87‑1 (MQ=255)                                                                          aaaGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGtt                                                                             <  7:220236/148‑1 (MQ=255)                                                                             ggCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCaa                                                                         <  6:192314/149‑1 (MQ=255)                                                                             ggCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCaa                                                                         <  5:95316/149‑1 (MQ=255)                                                                               ccTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATg                                                                       <  7:283636/149‑1 (MQ=255)                                                                                cTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTg                                                                                                                     >  2:320822/1‑102 (MQ=255)                                                                                cTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTg                                                                                                                     <  1:320822/102‑1 (MQ=255)                                                                                cTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAAt                                                                        >  8:227711/1‑147 (MQ=255)                                                                                 tGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAg                                                                     >  7:339771/1‑149 (MQ=255)                                                                                    aGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCgg                                                                  >  8:215604/1‑149 (MQ=255)                                                                                     gAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGt                                                                 <  8:339771/149‑1 (MQ=255)                                                                                       gccatatGACGAATGCACTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTaa                                                               >  6:155996/7‑149 (MQ=255)                                                                                             tGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTc                                                         >  4:2575/1‑149 (MQ=255)                                                                                               aCGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTcc                                                        <  4:191539/148‑1 (MQ=255)                                                                                                 gAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCa                                                                          <  4:120755/128‑1 (MQ=255)                                                                                                 gAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCa                                                                          >  3:120755/1‑128 (MQ=255)                                                                                                 gAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAAt                                                     <  7:227711/149‑1 (MQ=255)                                                                                                 gAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAAt                                                     <  7:301637/149‑1 (MQ=255)                                                                                                            tCATATGGCGCGCTTATTGCCAGTTGGAAACCGCAGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAAt                                                                        >  8:155347/1‑119 (MQ=255)                                                                                                            tCATATGGCGCGCTTATTGCCAGTTGGAAACCGCAGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAAt                                                                        <  7:155347/119‑1 (MQ=255)                                                                                                             cATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAg                                         >  3:189039/1‑149 (MQ=255)                                                                                                                  ggCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCg                                                                                                               <  2:279542/74‑1 (MQ=255)                                                                                                                  ggCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCg                                                                                                               >  1:279542/1‑74 (MQ=255)                                                                                                                   gcgcgcTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCt                                    >  3:84027/1‑148 (MQ=255)                                                                                                                     gcgcTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCa                                  >  5:210436/1‑148 (MQ=255)                                                                                                                      cgcTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGATCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCaaa                                <  5:144044/149‑1 (MQ=255)                                                                                                                              gCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGc                         <  1:21160/148‑1 (MQ=255)                                                                                                                                cAGTTGGAAACCGCCGATTGCATCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACaa                                                            <  7:289174/111‑1 (MQ=255)                                                                                                                                cAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGCCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACaa                                                            >  8:289174/1‑111 (MQ=255)                                                                                                                                 aGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAaac                               >  4:179754/1‑139 (MQ=255)                                                                                                                                 aGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAaac                               <  3:179754/139‑1 (MQ=255)                                                                                                                                   ttGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGt                                                                 <  2:140846/103‑1 (MQ=255)                                                                                                                                        aacgtgagATTGTAGCGACGACTAGGTCATCCCCTTGCGCGCTCTGTACCCGCAGTGGGCGTGTTGCACTACTTAGAAAGGTTGTTTCAATGAGCTGTAACAATTGCATTGACCTCGCTGAGGTGCTCAAACAACGGCATGTGACCATg              <  4:84027/142‑1 (MQ=255)                                                                                                                                          ccgccgATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCt            <  5:309137/149‑1 (MQ=255)                                                                                                                                           cgccgATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCAt               >  2:397573/1‑145 (MQ=255)                                                                                                                                           cgccgATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCAt               <  1:397573/145‑1 (MQ=255)                                                                                                                                           cgccgATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCTg           >  8:323155/1‑149 (MQ=255)                                                                                                                                            gccgATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCTGt          >  1:38634/1‑149 (MQ=255)                                                                                                                                                    cAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCTGTCCATCGCt  <  5:155996/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GTATTTCAGTAATCCGCTGATTTGAGGTCCTTTCGGTCATGCAATGGCCGAAAGCCCTCCAGGCCGCATCCTAAAAGGCCTGCAGAATTTTCTGACGAGTGCATTCGTCATATGGCGCGCTTATTGCCAGTTGGAAACCGCCGATTGCAGCGACGCCTAGGTCATCCCCTGGCGCGCTCTGTACCCGCAGTCGGCGTGGTCCACTCCTTACAAAGGTAGTTTCAATGAGCGGTAACAATTCCAATGACCTCGCTCAGGGGCTCAAACAACGGCATGTGACCATGCTGTCCATCGCT  >  NC_002947/341260‑341555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.