| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 497823 = | 75 (1.170) | 4 (0.070) | 3/240 | NT | 5.6% | coding (1695/2388 nt) | PP_0409 | two‑component system sensor histidine kinase |
| ? | NC_002947 | 497875 = | 64 (1.060) | coding (1747/2388 nt) | PP_0409 | two‑component system sensor histidine kinase | |||||
ACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACTGGGGCAG > NC_002947/497675‑497967 | acaGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCAGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTc > 4:244979/1‑149 (MQ=255) gggTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTgg < 1:369478/149‑1 (MQ=255) ggTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTgg > 2:299185/1‑148 (MQ=255) gTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGa < 3:89362/149‑1 (MQ=255) aCCTGGCCCTGGCCAGCGACCAGGACGGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATcaca < 8:2597/149‑1 (MQ=255) cctggccctggcCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATcacac < 2:169713/149‑1 (MQ=255) cctggccctggcCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATca > 1:17223/1‑146 (MQ=255) cctggccctggcCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATca < 2:17223/146‑1 (MQ=255) gtcctggccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAggg > 5:353118/3‑149 (MQ=255) ggcataggccagctcgcacatcgacacttccagcttgagcacggtcagcatctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTgg > 7:181330‑M1/145‑148 (MQ=255) cctggccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTgg > 1:239077/1‑133 (MQ=255) cctggccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTgg < 2:239077/133‑1 (MQ=255) cctagccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGc > 7:275312/1‑148 (MQ=255) cataggccagctcgcacatcgacacttccagcttgagcacggtcagcatctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGa > 6:34660‑M1/143‑148 (MQ=255) cataggccagctcgcacatcgacacttccagcttgagcacggtcagcatctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGa < 5:34660‑M1/6‑1 (MQ=255) cataggccagctcgcacatcgacacttccagcttgagcacggtcagcatctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGAc < 1:278398‑M1/7‑1 (MQ=255) ctggccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCaa < 6:177636/149‑1 (MQ=255) gccAGCGACCAGGACTGGTCCTGGCAGGGGCGCATCTCTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGc > 1:66752/1‑149 (MQ=255) aGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGc > 3:301957/1‑149 (MQ=255) gCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGcc < 8:275312/149‑1 (MQ=255) aCCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAg > 4:231431/1‑149 (MQ=255) ccAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgc > 6:384432/1‑149 (MQ=255) aGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgctg < 6:353118/149‑1 (MQ=255) aGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgctg < 8:280288/149‑1 (MQ=255) gTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgctggcgctgg > 2:336533/1‑149 (MQ=255) gTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgctggcgctgg < 6:351420/149‑1 (MQ=255) tCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTg > 2:229710/1‑110 (MQ=255) tCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAgctggcgctggc > 3:101486/1‑149 (MQ=255) tCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACCGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTg < 1:229710/110‑1 (MQ=255) gccAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGaa < 7:342598/146‑1 (MQ=255) gcgcATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAgg < 3:244979/149‑1 (MQ=255) gcATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGag > 7:136799/1‑149 (MQ=255) gcATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGag > 8:390578/1‑149 (MQ=255) gcacggtcagcatctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGACATCACACAGGGCAAGCGGGCCGAgctggcgctggc < 3:36404‑M1/42‑1 (MQ=255) aTC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGag > 3:91269/1‑147 (MQ=255) aTC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGag > 2:57023/1‑147 (MQ=255) tCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTg > 4:214537/1‑149 (MQ=255) aCCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTgc < 8:136799/148‑1 (MQ=255) cccGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGACAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTgcgc > 2:336924/1‑149 (MQ=255) ccGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGAGGTAGAGGGGGGAGTGGAAGTATGGCACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAg > 1:337432/1‑148 (MQ=255) ccGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTgcgc > 3:391809/1‑148 (MQ=255) gtttctcccagttgatcatgaagttcccgggggagacgggctttttcctcttcacgctcgctctcctggtgggccgagagttcgcgcagctgctcCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGa > 4:50495‑M1/96‑149 (MQ=255) atctgccccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGa > 4:36404‑M1/96‑149 (MQ=255) ggCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGaa > 3:341337/1‑149 (MQ=255) gggCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAActct < 7:95095/149‑1 (MQ=255) gCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCg > 6:360906/1‑149 (MQ=255) ccagttcatcatgcacttcccgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGa < 3:50495‑M1/54‑1 (MQ=255) cGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCgg < 5:384432/149‑1 (MQ=255) gcgcTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAAct < 1:255734/138‑1 (MQ=255) gcgcTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAAct > 2:255734/1‑138 (MQ=255) gcgcTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCAcc > 6:30393/1‑149 (MQ=255) ccGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCa < 2:47386/139‑1 (MQ=255) ccGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCa > 1:47386/1‑139 (MQ=255) ccGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgc < 5:360906/149‑1 (MQ=255) gATATCCAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGGGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGGCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgt < 3:255438/149‑1 (MQ=255) gATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgt > 6:9645/1‑149 (MQ=255) atatCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGagc > 5:74233/1‑114 (MQ=255) atatCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGagc < 6:74233/114‑1 (MQ=255) cgggcgatacgggctttttcctcttcacgcacgctctccaggtgggccgagagttcgcgcagctgctcCTgg < 6:219292‑M1/4‑1 (MQ=255) tCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGa < 7:127053/109‑1 (MQ=255) tCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGa > 8:127053/1‑109 (MQ=255) tCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgtgcg < 1:57023/148‑1 (MQ=255) tCAAGGCCAGCGCCCGGCATCTGGACAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgtgcgt < 1:336924/149‑1 (MQ=255) cAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgtgcgt > 5:83235/1‑148 (MQ=255) aaGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGagag < 7:115373/140‑1 (MQ=255) aaGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGagag > 8:115373/1‑140 (MQ=255) gCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGaa > 8:180607/1‑147 (MQ=255) gCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAaga < 3:214537/149‑1 (MQ=255) gCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCCGGAGAGCGTGCGTGAaga < 1:299185/149‑1 (MQ=255) cATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGGCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCg < 4:301957/149‑1 (MQ=255) aTCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCg > 8:13470/1‑148 (MQ=255) aTCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCg > 4:224530/1‑148 (MQ=255) tGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATc > 8:80522/1‑149 (MQ=255) ggCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCTAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATc < 1:336533/147‑1 (MQ=255) ggCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTAGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTa < 3:231431/145‑1 (MQ=255) cAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGccc > 3:69531/1‑149 (MQ=255) aaCGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCg < 4:101486/149‑1 (MQ=255) ggCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgtgc < 2:359143/118‑1 (MQ=255) ggCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAgcgtgc > 1:359143/1‑118 (MQ=255) ccAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAg < 4:341337/149‑1 (MQ=255) aGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTa < 7:370015/135‑1 (MQ=255) aGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTa > 8:370015/1‑135 (MQ=255) gTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAACGCCCGTATCGCCCGGGAAGTGCa > 2:347703/1‑149 (MQ=255) gTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCa > 2:278398/1‑149 (MQ=255) gtgtGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCatga < 1:261301/149‑1 (MQ=255) tgGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAagag > 6:241837/1‑114 (MQ=255) tgGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAagag < 5:241837/114‑1 (MQ=255) ggACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGGCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAAc < 8:47637/149‑1 (MQ=255) gACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACt > 7:342848/1‑149 (MQ=255) g‑‑‑‑‑‑‑‑‑‑‑gT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACTggg < 5:30393/149‑1 (MQ=255) g‑‑‑‑‑‑‑‑‑‑‑gT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACTggg < 7:80522/149‑1 (MQ=255) tAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACTGGGGCAg < 5:9645/149‑1 (MQ=255) | ACAGGGTGCAGGACCTGGCCCTGGCCAGCGACCAGGACTGGTCCTGGCAGGGGCGCATC‑CTCACCCGGCAGGGCGAACAGCGCTGGGCCGATATCAAGGCCAGCGCCCGGCATCTGGGCAACGGCCAGGTAGTGTGGGACG‑‑‑‑‑‑‑‑‑‑‑GT‑GTAGTCTGGGACATCACACAGGGCAAGCGGGCCGAGCTGGCGCTGGCGAAGTCCCAGGAGCAGCTGCGCGAACTCTCGGCCCACCTGGAGAGCGTGCGTGAAGAGGAAAAAGCCCGTATCGCCCGGGAAGTGCATGATGAACTGGGGCAG > NC_002947/497675‑497967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |