New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1205682 =	56 (0.880)	4 (0.060)	4/246	NT	6.6%	coding (80/546 nt)	PP_1057	PadR family transcriptional regulator
	?	NC_002947	1205719 =	59 (0.950)					coding (43/546 nt)	PP_1057	PadR family transcriptional regulator

GCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTAAAGACAAGC  >  NC_002947/1205535‑1205827                                                                                                                                                    |                                                                                                                                                   acatcgacgcagtagatgataatcatcagcattgaacggcttgtctttagatatatcttgagtaatatcttacgatatatcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgcc                                                                                                                                                   >  5:340603‑M1/148‑149 (MQ=255)  catcgacgcagtagatgataatcatcagcattgaagggcttgtctttagatatatcttgagtaatatcttacgatatatcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgcc                                                                                                                                                   <  6:340603‑M1/2‑1 (MQ=255)   atcgacgcagtagatgataatcatcagcattgaagggcttgtctttagatatatcttgagtaatatcttacgatatatcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgcccg                                                                                                                                                 <  4:249916‑M1/4‑1 (MQ=255)   atcgacgcagtagatgataatcatcagcattgaagggcttgtctttagatatatcttgagtaatatcttacgatatatcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgcccg                                                                                                                                                 <  2:391142‑M1/4‑1 (MQ=255)   atcgacgcagtagatgataatcatcagcattgaagggcttgtctttagatatatcttgagtaatatcttacgatatatcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatccctgcgagcggcgccccgcccg                                                                                                                                                 <  8:274506‑M1/4‑1 (MQ=255)   atcgacgcagtagatgataatcatcagcattgaagggcttctctttagatatatcttgagtaatatattacgatatatcgcaaacgacggagccatatccctatgcgagaacatcacactcatgatcccttcgagcggcgccccgcccg                                                                                                                                                 <  2:147411‑M1/4‑1 (MQ=255)      ttCAAGGAAGTTCAGCGTGGGGTAGATGACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCgggg                                                                                                                                              >  8:191732/1‑149 (MQ=255)        cAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCgggg                                                                                                                                              <  1:350753/147‑1 (MQ=255)          aGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGaa                                                                                                                                          <  5:274989/149‑1 (MQ=255)                   aGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGCTTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑cgcg                                                                                                                                 <  4:11828/148‑1 (MQ=255)                   aGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑cgcg                                                                                                                                 <  2:313569/148‑1 (MQ=255)                        ggggTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCcgc                                                                                                                           >  3:140114/1‑149 (MQ=255)                                    tCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcggg                                                                                                               >  2:121818/1‑149 (MQ=255)                                      cAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcgggcg                                                                                                             >  2:252335/1‑149 (MQ=255)                                          gCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACgggcggggc                                                                                                         <  4:341459/149‑1 (MQ=255)                                                gCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCt                                                                                                   <  5:282547/149‑1 (MQ=255)                                                 cTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTc                                                                                                  >  3:285115/1‑149 (MQ=255)                                                     aGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑cg                                                                                                                                   <  2:51571/112‑1 (MQ=255)                                                     aGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑cg                                                                                                                                   >  1:51571/1‑112 (MQ=255)                                                      gCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAgg                                                                                             <  3:392867/149‑1 (MQ=255)                                                      gCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAg                                                                                              <  1:73624/148‑1 (MQ=255)                                                          ccGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCCCCACGGGCGGGGCGCCGCTCGAAGGGa                                                                                           <  7:374053/147‑1 (MQ=255)                                                            gTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCAt                                                                                       <  1:252335/149‑1 (MQ=255)                                                             tCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATg                                                                                      <  7:191732/149‑1 (MQ=255)                                                               gAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAg                                                                                    >  7:220124/1‑149 (MQ=255)                                                                aaCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGTGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAgg                                                                                   >  6:401706/1‑149 (MQ=255)                                                                 aCAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAggg                                                                                  >  2:53303/1‑149 (MQ=255)                                                                  cAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcgggcgg                                                                                                            <  4:30055/122‑1 (MQ=255)                                                                  cAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcgggcgg                                                                                                            >  3:30055/1‑122 (MQ=255)                                                                     aTTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAggggg                                                                                >  2:336947/1‑147 (MQ=255)                                                                     aTTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAggggg                                                                                <  1:336947/147‑1 (MQ=255)                                                                       tttCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCCCGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGt                                                                            >  3:249916/1‑149 (MQ=255)                                                                           gATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTcgc                                                                        >  7:353724/1‑149 (MQ=255)                                                                               atcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgCCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCa                                                                                                                   <  4:33229‑M1/33‑1 (MQ=255)                                                                               atcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgCCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCa                                                                                                                   >  3:33229‑M1/70‑102 (MQ=255)                                                                                tcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgCCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcgggcg                                                                                                             >  1:124639‑M1/69‑107 (MQ=255)                                                                                tcgcaaacgacggagccctatccctatgcgcgaacatccccctcatgatcccttcgagcggcgccccgCCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCAcgggcg                                                                                                             <  2:124639‑M1/39‑1 (MQ=255)                                                                                 gCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACACCGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCgcgc                                                                      <  1:121818/146‑1 (MQ=255)                                                                                         ggTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCatagggataggg                                                          >  1:147641/1‑149 (MQ=255)                                                                                               aaCCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgt                                                    >  8:79413/1‑149 (MQ=255)                                                                                                aCCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtc                                                   >  5:369434/1‑149 (MQ=255)                                                                                                aCCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtc                                                   <  1:53303/149‑1 (MQ=255)                                                                                                aCCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtc                                                   <  1:25373/149‑1 (MQ=255)                                                                                                 ccGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCcgtcg                                                  >  1:391142/1‑149 (MQ=255)                                                                                                    tGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGttt                                               <  4:285115/149‑1 (MQ=255)                                                                                                       ccGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCg                                            <  2:147641/149‑1 (MQ=255)                                                                                                           gctgctCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGtt                                                >  1:332063/1‑141 (MQ=255)                                                                                                           gctgctCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGtt                                                <  2:332063/141‑1 (MQ=255)                                                                                                                 cGGCCTTCAATTCCAGCATCATCATCTTGAGGTCACCCGGGGCGAATACA‑CGCGGGGCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTcc                                                      <  6:321471/129‑1 (MQ=255)                                                                                                                 cGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTcc                                                      >  5:321471/1‑129 (MQ=255)                                                                                                                   tgcAGCAAGTCCAGCATCAGAAGCTTGAGGTCACCCGGGTAGAAGACA‑CGGTGGCGGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAg                                <  5:401706/147‑1 (MQ=255)                                                                                                                    ccAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGt                                   >  1:69719/1‑145 (MQ=255)                                                                                                                    ccAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGAGCATGAGGGGGATGTTCGCGTATAGGGATAGGGCTCCGTCGTTTGCGATATATCGt                                   >  5:107892/1‑145 (MQ=255)                                                                                                                       gCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGatat                            >  6:200098/1‑149 (MQ=255)                                                                                                                        cAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGatat                            >  1:374013/1‑148 (MQ=255)                                                                                                                            tCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACt                        >  2:179649/1‑148 (MQ=255)                                                                                                                               aGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAg                    <  5:200098/149‑1 (MQ=255)                                                                                                                                gCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGa                   <  5:232502/149‑1 (MQ=255)                                                                                                                                  aTCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGata                 <  7:79413/149‑1 (MQ=255)                                                                                                                                    cagcagCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGatata               >  2:90460/1‑149 (MQ=255)                                                                                                                                      gcagcTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATc             >  3:142593/1‑149 (MQ=255)                                                                                                                                      gcagcTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATc             >  7:187494/1‑149 (MQ=255)                                                                                                                                          cTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGTGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTaaa         <  8:220124/149‑1 (MQ=255)                                                                                                                                          cTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTaaa         <  7:182429/149‑1 (MQ=255)                                                                                                                                             gAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTa                          >  3:138885/1‑129 (MQ=255)                                                                                                                                             gAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTa                          <  4:138885/129‑1 (MQ=255)                                                                                                                                                gTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTAAAGACAAg   >  7:247924/1‑149 (MQ=255)                                                                                                                                                 tCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGGGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTAAAGACAAGc  >  1:288013/1‑149 (MQ=255)                                                                                                                                                 tCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATc                                     <  6:330432/114‑1 (MQ=255)                                                                                                                                                 tCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATc                                     >  5:330432/1‑114 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCCTCTTCAAGGAAGTTCAGCGTGGGGTAGATCACTCCAGGGCTTGGGCTGTAGCTGCCGTCGAACAGATTTTCGATCTGGCGGATCAGGTCGTAACCGTGGCCGGGCTGCTCGGCCAGCAAGTCCAGCATCAGCAGCTTGAGGTCACCCGGGGCGAAGACA‑CGCGGGCCGCGCTCGCCACGGGCGGGGCGCCGCTCGAAGGGATCATGAGGGGGATGTTCGCGCATAGGGATAGGGCTCCGTCGTTTGCGATATATCGTAAGATATTACTCAAGATATATCTAAAGACAAGC  >  NC_002947/1205535‑1205827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.