| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1311719 | 48 (0.750) | 8 (0.140) | 7/228 | NT | 17.6% | intergenic (‑187/+91) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA |
| ? | NC_002947 | = 1311778 | 32 (0.560) | intergenic (‑246/+32) | PP_1144/rapA | membrane protein/RNA polymerase‑associated protein RapA | |||||
CAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCA > NC_002947/1311571‑1311865 | cAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC > 7:21424‑M1/1‑149 (MQ=255) cTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAAAGCCTTCCTGTGGGAGCGGGCGAGcc > 8:175258/1‑149 (MQ=255) cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa < 5:183595/149‑1 (MQ=255) aGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa < 5:145886/149‑1 (MQ=255) gACTGTCCAGATGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAg < 1:405273/149‑1 (MQ=255) gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCAGCGAAg > 1:164202/1‑149 (MQ=255) tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAt > 3:139594/1‑149 (MQ=255) tCCAGAGGCAGTATATGAAGTAGTAATTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGTGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcg < 8:318785/139‑1 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcg > 7:318785/1‑139 (MQ=255) tCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTCGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATcc < 7:173177/149‑1 (MQ=255) tCCAGAGGCAGTACAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc > 3:73624/1‑148 (MQ=255) cAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa < 7:100722/132‑1 (MQ=255) cAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa > 8:100722/1‑132 (MQ=255) agGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAccg > 3:398973/1‑146 (MQ=255) gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCgg > 5:196613/1‑149 (MQ=255) gCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAAAGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCgg < 7:175258/149‑1 (MQ=255) cAGTACAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGt < 4:73624/149‑1 (MQ=255) aGTATAGGAAGCATTACTTACGCCTTACTGACAAATGGCACAATCATTTCTACGATTTCTTTATAACTCCA‑ATCGCTGTGAGTAATAAATTTGGGGCCCTAATCCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGt < 4:398973/148‑1 (MQ=255) taGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATg < 2:382145/149‑1 (MQ=255) taGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATg < 5:358332/149‑1 (MQ=255) ggaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGAtac > 4:100983/1‑146 (MQ=255) ggaaggaGTACTTAAGCCTCCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGc > 4:130525/1‑148 (MQ=255) gaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCa > 7:11560/1‑149 (MQ=255) aggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCAcc < 2:283823/149‑1 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAGATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGAacgcccgcgaacaccggcaaagccgttggcatccaccgcag > 1:111967‑M1/1‑108 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc > 7:182677/1‑120 (MQ=255) cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc < 8:182677/120‑1 (MQ=255) ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGc > 4:133205/1‑149 (MQ=255) aaGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGcc < 3:209737/148‑1 (MQ=255) aaGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGcc < 5:424631/148‑1 (MQ=255) aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCgg < 8:11560/149‑1 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCT‑ATCGCAGTGAGTAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgt < 4:123123/149‑1 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgt < 4:139594/149‑1 (MQ=255) gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTCGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGgt < 1:129172/149‑1 (MQ=255) ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa < 4:370298/103‑1 (MQ=255) ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa > 3:370298/1‑103 (MQ=255) ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCAAACACTGCGGTGGATGCCACCGGATTTGCCGctg > 4:336938/1‑149 (MQ=255) cTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTTCCGgtgt > 5:122455/1‑149 (MQ=255) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCg > 7:121753/1‑131 (MQ=255) tGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCg < 8:121753/131‑1 (MQ=255) aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGGGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCgg < 8:105609/148‑1 (MQ=255) aTGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc < 2:111967‑M1/148‑60 (MQ=255) ggCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc < 5:141789‑M1/146‑60 (MQ=255) ggCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc > 6:141789‑M1/1‑87 (MQ=255) ggCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCg > 4:295145/1‑132 (MQ=255) ggCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCg < 3:295145/132‑1 (MQ=255) actacaatgATTTCTACGATTTGGTTAAAACTCCA‑ATCGCAGTGACGAATAAATTGGGCGCCCTAATCCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcc > 1:191579‑M2/4‑146 (MQ=255) caATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgct > 3:133205‑M2/1‑142 (MQ=255) aaTGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATACCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctc > 3:100983‑M2/1‑141 (MQ=255) ttaTTTCTACGTTTTGGTTATAACTCCA‑TTCGCAGTTAGGATAAAATTTGGGGCCATATTTCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTTGATGCCACCGGCTTTGCCGGTGTTCGCgg < 8:5710/133‑1 (MQ=25) tGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCAGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCGGGTGTTCGCgg > 7:5710/1‑135 (MQ=255) cTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAg < 8:21424/148‑1 (MQ=255) ttGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACTGCGGTGGATGCCACCGGCGTTGGCGGTGTTAGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg > 6:86391/1‑149 (MQ=255) ttGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACACGGCGGTGGATTCCACCGGCGTTGGCCGTGTTAGCGGGCGTGCCCGCTCCCCCAAAGGGGGCgg > 2:347545/1‑149 (MQ=37) tCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATACCCAGCGGTGGATGACACCCGCTTTTCCGGTGTTAGCGGGCGTGCCCCCGCCCACCACGGGCCCCGGGCCAgcgc > 7:220807/1‑147 (MQ=255) aTCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca < 3:336938/149‑1 (MQ=255) gCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagccagc < 3:130525/148‑1 (MQ=255) tAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcc > 3:129234‑M1/1‑38 (MQ=255) tAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatcaaccgcagtggatgcttcgcgggctcgcccgctcc < 4:129234‑M1/106‑69 (MQ=255) tttGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgtgggctcgcccgctcccaca < 8:278511‑M1/106‑73 (MQ=255) tttGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgtgggctcgcccgctcccaca > 7:278511‑M1/1‑34 (MQ=255) cgcTATTGCGTTCGTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCa < 8:220807/147‑1 (MQ=255) aTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGgcgc < 5:86391/149‑1 (MQ=255) tGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCa < 7:120834/149‑1 (MQ=255) cTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc < 1:373699/149‑1 (MQ=255) tgtgGGAGCGGGCGAGCCCACGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaa > 7:278511‑M2/1‑72 (MQ=255) tgtgGGAGCGGGCGAGCCCACGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaa < 8:278511‑M2/106‑35 (MQ=255) ggAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc > 5:124987‑M1/1‑9 (MQ=255) ggAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctc < 6:124987‑M1/68‑60 (MQ=255) ggAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTTGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaattta < 4:129234‑M2/106‑39 (MQ=255) ggAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaattta > 3:129234‑M2/1‑68 (MQ=255) gAGCGGGCacgcccgcgaacaccggcaaagccggtggtatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcatt > 3:100983‑M1/1‑8 (MQ=255) gAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgc < 2:79988‑M1/56‑49 (MQ=255) gAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgc > 1:79988‑M1/1‑8 (MQ=255) aGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattg > 3:133205‑M1/1‑7 (MQ=255) ggCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaagggattagggcgcccaatttattcgtcactgcgattggagttttaaccaaatcgtagaaatcattgtagt > 1:191579‑M1/1‑3 (MQ=255) ggCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg < 3:40099/127‑1 (MQ=255) ggCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAgg > 4:40099/1‑127 (MQ=255) | CAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCA‑ATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGGATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCA > NC_002947/1311571‑1311865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |