New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1314117 =	56 (0.880)	4 (0.060)	4/246	NT	7.1%	coding (540/2847 nt)	rapA	RNA polymerase‑associated protein RapA
	?	NC_002947	1314174 =	51 (0.820)					coding (483/2847 nt)	rapA	RNA polymerase‑associated protein RapA

GCCACTTGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTGGTGTGCTGCAGG  >  NC_002947/1313974‑1314261                                                                                                                                                  |                                                                                                                                                   gcCACTTGCAGATTGAAGCGCCGGCGCATTTCCACAAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑Ac                                                                                                                                              >  4:354519/1‑149 (MQ=255)  ccACTTGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACt                                                                                                                                             <  2:70353/149‑1 (MQ=255)  ccACTTGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACt                                                                                                                                             <  2:165538/149‑1 (MQ=255)   cACTTGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACtt                                                                                                                                            <  5:88400/149‑1 (MQ=255)      ttGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGAGGCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTtcg                                                                                                                                          >  1:122145/1‑149 (MQ=255)      ttGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTtcgt                                                                                                                                         >  8:217264/1‑149 (MQ=255)        gCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTtcgtcg                                                                                                                                       >  7:180763/1‑149 (MQ=255)        gCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTtcgtc                                                                                                                                        <  3:354519/148‑1 (MQ=255)            aTTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCca                                                                                                                                   <  2:121974/149‑1 (MQ=255)                               tCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCCGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGgcgc                                                                                                                 <  7:217264/148‑1 (MQ=255)                                 caccaGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGGCGGCCATCAGAACGCGCGGGGCGCTg                                                                                                               <  5:257439/148‑1 (MQ=255)                                     aGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCTAGCAGAACGCGCGGGGCGCTGC‑GGTc                                                                                                         <  2:122145/149‑1 (MQ=255)                                         aCTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGc                                                                                                      >  1:109036/1‑148 (MQ=255)                                           tGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGAc                                                                                                   >  2:312922/1‑149 (MQ=255)                                                  ggAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑g                                                                                                            <  6:262980/133‑1 (MQ=255)                                                  ggAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑g                                                                                                            >  5:262980/1‑133 (MQ=255)                                                        tttCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAAtg                                                                                      >  1:254408/1‑149 (MQ=255)                                                        accctgcagcacaccagcaagcagatgcagtcggcactgtgggggttgggcggctgccgcgcacagcccatcgcccaccaactgcacattGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCgg                                                                                            >  6:48734‑M1/91‑145 (MQ=255)                                                        accctgcagcacaccagcaagcagatgcagtcggcactgtgggggttgggcggctgccgcgcacagcccatcgcccaccaactgcacattGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCgg                                                                                            <  5:48734‑M1/55‑1 (MQ=255)                                                         ttCCGGCACCATGT‑TCATGACGCGGCTGGCGGGTCCCGACATCATTTGGCGGTGAATGACCACGCCGGCTTC‑GCTGGGTTTGCCCATGCCCAACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAAt                                                                                       <  1:312922/148‑1 (MQ=255)                                                          cctgcagcacaccagcaagcagatgcagtcggcactgtgggggttgggcggctgccgcgcacagcccatcgcccaccaactgcacattGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCggg                                                                                           <  8:218507‑M1/56‑1 (MQ=255)                                                          cctgcagcacaccagcaagcagatgcagtcggcactgtgggggttgggcggctgccgcgcacagcccatcgcccaccaactgcacattGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCggg                                                                                           >  7:218507‑M1/89‑144 (MQ=255)                                                           ccGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAAtgtg                                                                                    <  2:254408/148‑1 (MQ=255)                                                               cACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGtt                                                                               <  2:109036/149‑1 (MQ=255)                                                                aCCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTtg                                                                              >  4:6315/1‑149 (MQ=255)                                                                  cAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTtggt                                                                            >  5:244218/1‑149 (MQ=255)                                                                  cAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTtggt                                                                            >  4:95022/1‑149 (MQ=255)                                                                    ggA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAgg                                                                                                                                                    >  3:47211/1‑77 (MQ=255)                                                                    ggA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAgg                                                                                                                                                    <  4:47211/77‑1 (MQ=255)                                                                    ggA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTtggtgg                                                                          >  7:246417/1‑149 (MQ=255)                                                                     gA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTAC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTggg                                                                         <  4:142373/149‑1 (MQ=255)                                                                           gTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATg                                                                    >  4:116782/1‑149 (MQ=255)                                                                            tACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATgg                                                                   >  7:241238/1‑149 (MQ=255)                                                                              cgcgGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATggg                                                                  <  6:244218/148‑1 (MQ=255)                                                                              cgcgGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGc                                                                 >  4:233296/1‑149 (MQ=255)                                                                                      gcgcGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTgcgc                                                          <  2:81907/148‑1 (MQ=255)                                                                                        gcgACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAAt                                                                                       >  5:156034/1‑117 (MQ=255)                                                                                        gcgACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAAt                                                                                       <  6:156034/117‑1 (MQ=255)                                                                                            cccGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCgg                                                        <  4:373193/144‑1 (MQ=255)                                                                                            cccGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCgg                                                        >  3:373193/1‑144 (MQ=255)                                                                                             ccGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAgccg                                                  >  1:363687/1‑149 (MQ=255)                                                                                              cGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAgccgc                                                 <  8:180763/149‑1 (MQ=255)                                                                                              cGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAgccgc                                                 >  5:412574/1‑149 (MQ=255)                                                                                               gACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTCTGATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAgccgc                                                 >  1:267892/1‑149 (MQ=255)                                                                                                      gTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAAcccc                                         <  2:267892/149‑1 (MQ=255)                                                                                                                aaTGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGc                                                       <  3:64657/125‑1 (MQ=255)                                                                                                                aaTGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGc                                                       >  4:64657/1‑125 (MQ=255)                                                                                                                      cAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCa                         >  4:300273/1‑149 (MQ=255)                                                                                                                      cAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCa                         >  2:20049/1‑149 (MQ=255)                                                                                                                          ccGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCtg                     >  2:202620/1‑149 (MQ=255)                                                                                                                           cGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCtgc                    >  3:24036/1‑149 (MQ=255)                                                                                                                           cGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCtgc                    <  3:300273/149‑1 (MQ=255)                                                                                                                               ttC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCtgcttgc                <  3:6315/149‑1 (MQ=255)                                                                                                                               ttC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCAGCtgcttgc                >  8:361437/1‑149 (MQ=255)                                                                                                                                   gATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTgg             >  7:312530/1‑149 (MQ=255)                                                                                                                                   gATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTg              <  1:20049/148‑1 (MQ=255)                                                                                                                                      ggTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGc                          >  4:206702/1‑133 (MQ=255)                                                                                                                                      ggTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGc                          <  3:206702/133‑1 (MQ=255)                                                                                                                                       gTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTGgtgt          <  3:95022/148‑1 (MQ=255)                                                                                                                                        ttttGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAg                                                     <  7:294941/104‑1 (MQ=255)                                                                                                                                        ttttGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAg                                                     >  8:294941/1‑104 (MQ=255)                                                                                                                                           tGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTGGTGtgctg      <  4:24036/148‑1 (MQ=255)                                                                                                                                             cccAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGCGGGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTgcgc                                                          >  1:84781/1‑95 (MQ=255)                                                                                                                                             cccAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTgcgc                                                          <  2:84781/94‑1 (MQ=255)                                                                                                                                              ccAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTGGTGTGCTGCAgg  <  1:202620/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GCCACTTGCAGATTGAAGCGCCGGCGCATTTCCACCAGCCACTGGTGCTGGAGGTTTTCCGGCACCAGGA‑TCAGTACGCGGCTGGCGCGACCCGACAGCAGTTGGCGGTGAATGACCAGGCCGGCTTC‑GATGGTTTTGCCCAGGCCC‑ACTTCGTCGGCCAGCAGAACGCGCGGGGCGCTGC‑GGTCGGCGACTTCGCGGGCAATGTGCAGTTGGTGGGCGATGGGCTGTGCGCGGCAGCCGCCCAACCCCCACAGTGCCGACTGCATCTGCTTGCTGGTGTGCTGCAGG  >  NC_002947/1313974‑1314261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.