New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1855815	46 (0.720)	3 (0.050)	3/244	NT	6.2%	coding (827/1341 nt)	PP_1659	hypothetical protein
	?	NC_002947	= 1855848	47 (0.760)					coding (860/1341 nt)	PP_1659	hypothetical protein

ACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGAAGGCCAT  >  NC_002947/1855668‑1855962                                                                                                                                                    |                                                                                                                                                    aCGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTC                                                                                                                                                     >  4:248035‑M1/1‑148 (MQ=255)   gCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGAc                                                                                                                                                  <  5:401919/149‑1 (MQ=255)         gACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGa                                                                                                                                            <  5:328631/149‑1 (MQ=255)                     tACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCaa                                                                                                                                >  5:243007/1‑149 (MQ=255)                           cccGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTc                                                                                                                                              <  1:20878/129‑1 (MQ=255)                           cccGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTc                                                                                                                                              >  2:20878/1‑129 (MQ=255)                            ccGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCg                                                                                                                         >  6:86199/1‑149 (MQ=255)                              ggCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCttttccggcacgttgcgcacgtgctcgaac                                                                                                                       <  1:298802‑M1/149‑31 (MQ=255)                                 aaagCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGaaaa                                                                                                                    <  8:169892/146‑1 (MQ=255)                                 aaCGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGaaaa                                                                                                                    <  6:298467/149‑1 (MQ=255)                                   cGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAga                                                                                                                  >  4:249854‑M2/1‑147 (MQ=255)                                      cGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAgacca                                                                                                               <  7:232165‑M2/149‑6 (MQ=255)                                           cGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCttttccggcacgttgcgcacgtgctcgaacgtcgaccatac                                                                                                            >  8:46269‑M1/1‑106 (MQ=255)                                           cGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCttttccggcacgttgcgcacgtgctcgaacgtcgaccatac                                                                                                            <  7:46269‑M1/147‑42 (MQ=255)                                               cAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATg                                                                                                       >  4:27319/1‑148 (MQ=255)                                                aaGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGaa                                                                                                     <  6:243007/149‑1 (MQ=255)                                                  gggggCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAAc                                                                                                    >  8:151701/1‑148 (MQ=255)                                                         gTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCaa                                                                                            <  3:248035/149‑1 (MQ=255)                                                            atgccggAGTCGTGCAATGCGCAGAAGTGCGGGTTGGTTGGCCTGCAGTTCGTGCAGAAGACGGAAGGCGGTCCTCAGTGGGTATGGTCGACGTTGGAGGTGGTGCGCTACGTGCCGGTAAAGACCACGCCATTGATCGAGCGCTAgg                                                                                          <  6:106764/142‑1 (MQ=255)                                                               cccGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGcc                                                                                      >  7:348579/1‑149 (MQ=255)                                                                   aGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTAc                                                                                  <  8:232165/149‑1 (MQ=255)                                                                   aGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTAc                                                                                  <  7:151701/149‑1 (MQ=255)                                                                        tGCAATGCGCATAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGACCGCAAGCGGCCCTACCTga                                                                              >  2:243662/1‑147 (MQ=255)                                                                        tGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGtt                                                                             <  3:27319/149‑1 (MQ=255)                                                                         gCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTc                                                                            >  1:77157/1‑149 (MQ=255)                                                                            aTGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACTTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGCGCCATACCtcttctcc                                                                         >  8:175353/1‑147 (MQ=255)                                                                               cgcAGAAGGTCGGGCTGTTATGCCTGCACATCGTGCACAAGACCGAAGTCGCACCTCAGTGGGTATGGTCGACGATCTATCACGTTAGCAAATTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTacga                                                                       <  8:1995/148‑1 (MQ=255)                                                                                        tCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGc                                                                                                            >  8:98846/1‑102 (MQ=255)                                                                                        tCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGc                                                                                                            <  7:98846/102‑1 (MQ=255)                                                                                            gCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCg                                                         >  7:109336/1‑149 (MQ=255)                                                                                                   ggCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGcc                                                   <  1:243662/148‑1 (MQ=255)                                                                                                     ccTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGa                                                                                                                       <  6:327074/78‑1 (MQ=255)                                                                                                     ccTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGa                                                                                                                       >  5:327074/1‑78 (MQ=255)                                                                                                       tGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGt                                               >  2:187352/1‑148 (MQ=255)                                                                                                         cacaTCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGCTGaa                                            >  8:88944/1‑149 (MQ=255)                                                                                                          acaTCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGt                                                                              <  8:261616/114‑1 (MQ=255)                                                                                                          acaTCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGt                                                                              >  7:261616/1‑114 (MQ=255)                                                                                                             tCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGa                                                                                                  <  5:213463/91‑1 (MQ=255)                                                                                                             tCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGa                                                                                                  >  6:213463/1‑91 (MQ=255)                                                                                                              cGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAgc                                       >  7:283674/1‑149 (MQ=255)                                                                                                                   acaAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGccgccc                                  >  4:206883/1‑149 (MQ=255)                                                                                                                    caAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAAc                                           <  8:42754/139‑1 (MQ=255)                                                                                                                    caAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAAc                                           >  7:42754/1‑139 (MQ=255)                                                                                                                          cGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTac                                                                         <  2:301563/103‑1 (MQ=255)                                                                                                                          cGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTac                                                                         >  1:301563/1‑103 (MQ=255)                                                                                                                             aGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCACAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGt                        <  6:354479/149‑1 (MQ=255)                                                                                                                                  cACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGAc                   <  8:283674/149‑1 (MQ=255)                                                                                                                                     cTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCg                >  6:71296/1‑149 (MQ=255)                                                                                                                                     cTCAGTGGGTATGGTCGACGTTCGAGCACGTGAGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCg                >  1:70500/1‑149 (MQ=255)                                                                                                                                       cAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTc              <  3:118612/149‑1 (MQ=255)                                                                                                                                             gTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAgaccatacccactgaggtgcgccttcggtcttgtgcacgatgtgcaggcctaccagcccgaccttctgcgcattgcacgactcggggatcaccgcccccttgttcg          <  7:46269‑M2/147‑107 (MQ=255)                                                                                                                                             gTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAgaccatacccactgaggtgcgccttcggtcttgtgcacgatgtgcaggcctaccagcccgaccttctgcgcattgcacgactcggggatcaccgcccccttgttcg          >  8:46269‑M2/1‑41 (MQ=255)                                                                                                                                             gTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCgaagaa        <  5:86199/149‑1 (MQ=255)                                                                                                                                               aTGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGt               >  4:56157/1‑140 (MQ=255)                                                                                                                                               aTGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGt               <  3:56157/140‑1 (MQ=255)                                                                                                                                                tGGTCttttccggcacgttgcgcacgtgctcgaacgtcgaccatacccactgaggtgcgccttcggtcttgtgcacgatgtgcaggcctaccagcccgaccttctgcgcattgcacgactcggggatcaccgcccccttgttcgggtcg     <  7:232165‑M1/149‑145 (MQ=255)                                                                                                                                                tGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGAAGGc     <  8:109336/149‑1 (MQ=255)                                                                                                                                                  gTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGAAGGcc    <  1:187352/148‑1 (MQ=255)                                                                                                                                                   tCttttccggcacgttgcgcacgtgctcgaacgtcgaccatacccactgaggtgcgccttcggtcttgtgcacgatgtgcaggcctaccagcccgaccttctgcgcattgcacgactcggggatcaccgcccccttgttcgggtcggcg  >  4:249854‑M1/1‑2 (MQ=255)                                                                                                                                                   tCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAATGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGCAGGCCAt  >  6:58727/1‑149 (MQ=255)                                                                                                                                                   tCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGAAGGCCAt  <  2:77157/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ACGCCGTCGACGCGCTGGTCTACACCCCCGGCAACGCCGACCCGAACAAGGGGGCGGTGATCCCCGAGTCGTGCAATGCGCAGAAGGTCGGGCTGGTAGGCCTGCACATCGTGCACAAGACCGAAGGCGCACCTCAGTGGGTATGGTCGACGTTCGAGCACGTGCGCAACGTGCCGGAAAAGACCACGCCAATGAACGAGCGCAAGGGGCCCTACCTGTTCTACGACGCCCAGGCCAGCGACCGCCCGGTGAACGAGCCGCCCGCGCCACCGTGGGACCCGTCGAAGAAGGCCAT  >  NC_002947/1855668‑1855962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.