New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2260171 =	68 (1.060)	4 (0.070)	4/244	NT	6.6%	coding (759/2736 nt)	fimV	motility protein FimV
	?	NC_002947	2260221 =	47 (0.760)					coding (809/2736 nt)	fimV	motility protein FimV

TGCGCCTGCCCGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGTCGCGACAACGAAGAAC  >  NC_002947/2260023‑2260319                                                                                                                                                       |                                                                                                                                                     tGCGCCTGCCCGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAg                                                                                                                                                      >  7:182867/1‑149 (MQ=255) tGCGCCTGCCCGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAg                                                                                                                                                      >  3:177493/1‑149 (MQ=255)   cgctgcagcttgtccagctggctctgcaggtcggccatgcggcttttcagatcttcgttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccgg                                                                                                                                                      >  5:319608‑M1/149‑149 (MQ=255)   cgcCTGCCCGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAgg                                                                                                                                                     <  4:242363/148‑1 (MQ=255)    gctgcagcttgtccagctggctctgcaggtcggccatgcggcttttcagttcttcgttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccggg                                                                                                                                                     >  7:37811‑M1/148‑149 (MQ=255)    gctgcagcttgtccagctggctctgcaggtcggccatgcggcttttcagttcttcgttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccggg                                                                                                                                                     <  5:412001‑M1/2‑1 (MQ=255)           cGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTgaccagg                                                                                                                                            >  6:160968/1‑143 (MQ=255)              ccAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTcgc                                                                                                                                         <  4:274483/149‑1 (MQ=255)                 gcagcagATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTa                                                                                                                                      >  6:10769/1‑149 (MQ=255)                 gcagcagATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTa                                                                                                                                      >  4:63987/1‑149 (MQ=255)                 cagctggctctgcaggtcggccatgcggcttttcagttcttcgttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccgGGCTGCACCGTcgcg                                                                                                                                        <  2:388516‑M1/15‑1 (MQ=255)                  cagcagATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGt                                                                                                                                       <  2:337326/147‑1 (MQ=255)                      agATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGcc                                                                                                                                 <  4:147923/149‑1 (MQ=255)                          ccAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAgg                                                                                                                             >  2:237630/1‑149 (MQ=255)                          ccAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAgg                                                                                                                             >  7:182296/1‑149 (MQ=255)                           cAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAggg                                                                                                                            <  6:308412/149‑1 (MQ=255)                           cAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAgg                                                                                                                             <  6:268722/148‑1 (MQ=255)                           cAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACAGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAggg                                                                                                                            >  5:308412/1‑149 (MQ=255)                            agagCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGc                                                                                                                           >  3:205165/1‑149 (MQ=255)                                cATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTcg                                                                                                                                          <  8:228857/130‑1 (MQ=255)                                cATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTcg                                                                                                                                          >  7:228857/1‑130 (MQ=255)                                  tCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAAc                                                                                                                     >  4:261483/1‑149 (MQ=255)                                      ccAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTgc                                                                                                                 >  8:307014/1‑149 (MQ=255)                                      ccAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTgc                                                                                                                 <  8:182867/149‑1 (MQ=255)                                       cAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACAGTCGCGTATCGCCCAGGGCGACAACCTgcg                                                                                                                >  5:78835/1‑149 (MQ=255)                                        aGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTgcgc                                                                                                               <  4:141202/149‑1 (MQ=255)                                          ggcgaggcgaACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGTGCGACAACAAGCGCCt                                                                                                             >  6:288508/1‑149 (MQ=255)                                           gcgaggcgaACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTg                                                                                                            <  7:275277/149‑1 (MQ=255)                                            cgaggcgaACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCGTCCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTg                                                                                                            <  1:307926/149‑1 (MQ=255)                                             gaggcgaACCGCGAGGTGGCCGAGCAGTATGCGGCACTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTgg                                                                                                           >  1:269340/1‑149 (MQ=255)                                             gaggcgaACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGt                                                                                                          <  6:78835/149‑1 (MQ=255)                                                gcgaACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAg                                                                                                       >  3:317703/1‑149 (MQ=255)                                                     ttcttcgttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccgGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGccc                                                                                                    >  1:388516‑M1/99‑149 (MQ=255)                                                     ccGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCgg                                                                                                  >  8:19931/1‑149 (MQ=255)                                                      cgcgAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCggg                                                                                                 >  8:363728/1‑149 (MQ=255)                                                            ttgtcgcgacggctggtgtccaggctttcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccgGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCgg                                                                                                  >  2:219327‑M1/92‑144 (MQ=255)                                                            ttgtcgcgacggctggtgtccaggctgtcctgggccatggccagctcgtcattcaacgccttggcctggcctgcaccggcctggttgcccgGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCgg                                                                                                  <  1:219327‑M1/53‑1 (MQ=255)                                                            gTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCa                                                                                           <  5:249130/149‑1 (MQ=255)                                                             tGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAg                                                                                          <  4:177493/149‑1 (MQ=255)                                                               gCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCAGCGCCTGGTCAGCCCGGGCAACCAgg                                                                                         <  3:261483/148‑1 (MQ=255)                                                                   aGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGt                                                                                    <  2:237770/149‑1 (MQ=255)                                                                               c‑cTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCaggccaggcc                                                                        <  2:269340/149‑1 (MQ=255)                                                                                    gCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGt                                                                                                          >  2:62315/1‑111 (MQ=255)                                                                                    gCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGt                                                                                                          <  1:62315/111‑1 (MQ=255)                                                                                    gCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAgg                                                                    <  6:144643/149‑1 (MQ=255)                                                                                    gCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAg                                                                     <  7:307014/148‑1 (MQ=255)                                                                                    gCGTGAAGGCCGGCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCACGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAg                                                                     <  5:288508/148‑1 (MQ=255)                                                                                     cGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGc                                                                   <  4:205165/149‑1 (MQ=255)                                                                                       tGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTg                                                                                                            <  1:178614/106‑1 (MQ=255)                                                                                       tGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTg                                                                                                            >  2:178614/1‑106 (MQ=255)                                                                                       tGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGt                                                                 <  3:194205/149‑1 (MQ=255)                                                                                        gAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGtt                                                                >  5:54721/1‑149 (MQ=255)                                                                                        gAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGtt                                                                <  8:274761/149‑1 (MQ=255)                                                                                              cGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGa                                                          >  8:33581/1‑149 (MQ=255)                                                                                                      gggACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGcag                                                                                <  8:77225/119‑1 (MQ=255)                                                                                                      gggACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGcag                                                                                >  7:77225/1‑119 (MQ=255)                                                                                                       ggACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGAGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTg                                                   <  5:10769/147‑1 (MQ=255)                                                                                                             cgTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCgg                                                                                     <  1:324892/107‑1 (MQ=255)                                                                                                             cgTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCgg                                                                                     >  2:324892/1‑107 (MQ=255)                                                                                                              gTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGcaggccaggc                                                                         <  4:249204/118‑1 (MQ=255)                                                                                                              gTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGcaggccaggc                                                                         >  3:249204/1‑118 (MQ=255)                                                                                                               tGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGcc                                          >  1:130610/1‑148 (MQ=255)                                                                                                                gCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGcc                                          >  3:178915/1‑147 (MQ=255)                                                                                                                 cccGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAg                                       <  7:19931/149‑1 (MQ=255)                                                                                                                      cAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGa                                                       >  5:365594/1‑128 (MQ=255)                                                                                                                      cAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGa                                                       <  6:365594/128‑1 (MQ=255)                                                                                                                       aGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGTCCCAGGAAAGc                                 <  6:54721/149‑1 (MQ=255)                                                                                                                       aGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGc                                 >  7:276138/1‑149 (MQ=255)                                                                                                                        gCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGcc                                >  3:5539/1‑149 (MQ=255)                                                                                                                         cTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCt                               <  7:363728/149‑1 (MQ=255)                                                                                                                         cTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCt                               <  4:178915/149‑1 (MQ=255)                                                                                                                            gATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTg                              <  7:33581/147‑1 (MQ=255)                                                                                                                            gATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTg                              <  3:329213/147‑1 (MQ=255)                                                                                                                            gATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTg                              <  2:130610/147‑1 (MQ=255)                                                                                                                                      gCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGt                  >  8:148911/1‑149 (MQ=255)                                                                                                                                       ccGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATg                                             <  7:335002/121‑1 (MQ=255)                                                                                                                                       ccGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATg                                             >  8:335002/1‑121 (MQ=255)                                                                                                                                       ccGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGTc                 <  8:182296/149‑1 (MQ=255)                                                                                                                                                 cgccgAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGTCGCGACAACg        <  5:104386/149‑1 (MQ=255)                                                                                                                                                       GGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGTCGCGACAACGAAGAAc  >  4:317703‑M1/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                     TGCGCCTGCCCGACCAGCAGCAGATCCAGAGCATCGCCCAGGGCGAGGCGAACCGCGAGGTGGCCGAGCAGTATGCGGC‑CTGGCGTGAAGGCCGTCGCCTGGGACCGCGTGCCCGCCAGCTGGATGCCACTCGCCGTGGCG‑CCGCCGAGGCTGCACCGTCGCGTATCGCCCAGGGCGACAACCTGCGCCTGGTCAGCCCGGGCAACCAGGCCGGTGCAGGCCAGGCCAAGGCGTTGAATGACGAGCTGGCCATGGCCCAGGAAAGCCTGGACACCAGCCGTCGCGACAACGAAGAAC  >  NC_002947/2260023‑2260319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.