New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2701995 =	48 (0.750)	3 (0.050)	3/242	NT	6.5%	coding (645/804 nt)	dkgB	2,5‑diketo‑D‑gluconate reductase B
	?	NC_002947	2702031 =	40 (0.660)					coding (609/804 nt)	dkgB	2,5‑diketo‑D‑gluconate reductase B

GCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAC  >  NC_002947/2701850‑2702142                                                                                                                                                    |                                                                                                                                                    ctcagcccctatctgcagaacagcaagctgaccgcgttcctcaaggaacaagggatcaccgtgacctcgtacatgaccctggcctacggcaaagtgctaaaagacccggtactggcccagatcgccgccaagcacaaggctaccgtcGc                                                                                                                                                    >  4:169469‑M1/148‑149 (MQ=255)  cgcCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGCGGCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGcc                                                                                                                                                   >  1:61169/1‑148 (MQ=255)   cagcccctatctgcagaacagcaagctgaccgcgttcctcaaggaacaagggatcaccgtgacctcgtacatgaccctggcctacggcaaagtgctaaaagacccggtactggcccagatcgccgccaagcacaaggctaccgtcGcc                                                                                                                                                   <  6:19634‑M1/3‑1 (MQ=255)        gCCGTCAGGGCTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCa                                                                                                                                           <  5:78629/149‑1 (MQ=255)              aGGGCTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGccc                                                                                                                                     <  2:253890/149‑1 (MQ=255)                 gCTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccagg                                                                                                                                  >  2:148822/1‑149 (MQ=255)                  cTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccaggc                                                                                                                                 >  5:81443/1‑149 (MQ=255)                  cTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccaggc                                                                                                                                 >  2:84108/1‑149 (MQ=255)                   tGACCTCGCGGCCGTTGC‑GCACCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccaggc                                                                                                                                 >  5:44066/1‑148 (MQ=255)                       cTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGc                                                                                                                                                    >  2:188750/1‑125 (MQ=255)                       cTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGc                                                                                                                                                    <  1:188750/125‑1 (MQ=255)                       cTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAggg                                                                                                                            >  5:296362/1‑149 (MQ=255)                          gcgGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAgg                                                                                                                                         <  1:50391/133‑1 (MQ=255)                          gcgGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAgg                                                                                                                                         >  2:50391/1‑133 (MQ=255)                           cgGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAAc                                                                                                                        <  6:296362/149‑1 (MQ=255)                            ggCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAAcc                                                                                                                       >  7:195493/1‑149 (MQ=255)                              ccGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTg                                                                                                                     <  6:81443/149‑1 (MQ=255)                                   cgttcctcaaggaacaagggatcaccgtgacctcgtacatgaccctggcctacggcaaagtgctaaaagacccggtactggcccagatcgccgccaagcacaaggctaccgtcGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGc                                                                                                                  >  8:13792‑M1/114‑149 (MQ=255)                                    c‑gcTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGAc                                                                                                               <  6:351898/149‑1 (MQ=255)                                       cTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGGTCATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACg                                                                                                              <  1:84108/149‑1 (MQ=255)                                        tCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGc                                                                                                                  <  4:129046/143‑1 (MQ=255)                                        tCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGc                                                                                                                  >  3:129046/1‑143 (MQ=255)                                             cTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccaggccagg                                                                                                                             <  2:245165/127‑1 (MQ=255)                                             cTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCccaggccagg                                                                                                                             >  1:245165/1‑127 (MQ=255)                                             cTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCt                                                                                                       <  5:354941/149‑1 (MQ=255)                                                ggCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCtt                                                                                                      <  7:120427/147‑1 (MQ=255)                                                     tGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTg                                                                                               <  2:238597/149‑1 (MQ=255)                                                               gtcgtcGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                     >  7:313783/1‑149 (MQ=255)                                                                           cAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCg                                                                         >  5:384253/1‑149 (MQ=255)                                                                           cAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCg                                                                         >  4:47457/1‑149 (MQ=255)                                                                            aGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCgg                                                                        <  3:89130/149‑1 (MQ=255)                                                                                   tctcACGGGCAAGCAGGTTGCTGGCCAGTTTTTCACGCTTGGTTGACGAGGTGATCACGG‑CATAGCCAAGTTGCATGGCCCAGGCCAGTGCAACCTTGGCGACGGTAGCCTTGTGCTTGGCTGCGATCTGGGCCAGTACCGGGTCttt                                                                  <  4:334162/145‑1 (MQ=255)                                                                                   ggCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCtttt                                                                 <  8:195493/149‑1 (MQ=255)                                                                                   ggCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGACCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCtttt                                                                 <  6:384253/149‑1 (MQ=255)                                                                                     ccACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAg                                                               <  4:373749/149‑1 (MQ=255)                                                                                       aCGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCttt                                                                  >  3:334162/1‑144 (MQ=255)                                                                                          ggCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                     >  1:138098/1‑122 (MQ=255)                                                                                          ggCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                     <  2:138098/122‑1 (MQ=255)                                                                                               gCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCg                                                     >  2:224424/1‑149 (MQ=255)                                                                                                 aGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTggcgg                                                                                           >  7:290904/1‑109 (MQ=255)                                                                                                 aGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTggcgg                                                                                           <  8:290904/109‑1 (MQ=255)                                                                                                  ggTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAg                                                  >  3:57467/1‑149 (MQ=255)                                                                                                    ttGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGc                                                <  1:148822/149‑1 (MQ=255)                                                                                                       cTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGGTTGGCGGCGATCTgg                                                                                   >  1:334036/1‑111 (MQ=255)                                                                                                       cTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTgg                                                                                   <  2:334036/111‑1 (MQ=255)                                                                                                          gCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAgg                                            <  1:224424/147‑1 (MQ=255)                                                                                                           ccAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCTCTTTGCCGTAGGCCAGGGTc                                         <  1:299297/149‑1 (MQ=255)                                                                                                            cAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACTGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCa                                        >  3:41029/1‑149 (MQ=255)                                                                                                               gTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCACAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATg                                      >  7:12056/1‑148 (MQ=255)                                                                                                                     ccagatcgccgccaagcacaaggctaccgtcGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTgg                                                                                                                    >  7:184881‑M1/32‑65 (MQ=255)                                                                                                                     ccagatcgccgccaagcacaaggctaccgtcGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTgg                                                                                                                    <  8:184881‑M1/34‑1 (MQ=255)                                                                                                                            gTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGt                        >  2:157029/1‑149 (MQ=255)                                                                                                                                  gacgGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATccc                  <  8:313783/149‑1 (MQ=255)                                                                                                                                       gATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGt              >  2:172633/1‑148 (MQ=255)                                                                                                                                         tCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTcc           <  1:172633/149‑1 (MQ=255)                                                                                                                                           aCGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCtt         <  8:12056/149‑1 (MQ=255)                                                                                                                                                cATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAg      >  5:240027/1‑148 (MQ=255)                                                                                                                                                    GCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAc  >  1:157029‑M1/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCGCCAGGCCGTCAGGGCTGACCTCGCGGCCGTTGC‑GCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAC  >  NC_002947/2701850‑2702142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.