New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2701995 =	48 (0.750)	3 (0.050)	3/242	NT	6.5%	coding (645/804 nt)	dkgB	2,5‑diketo‑D‑gluconate reductase B
	?	NC_002947	2702031 =	40 (0.660)					coding (609/804 nt)	dkgB	2,5‑diketo‑D‑gluconate reductase B

CGCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGCAGATAGGGGCTGAG  >  NC_002947/2701885‑2702177                                                                                                                                                    |                                                                                                                                                   cgcTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGAc                                                                                                                                                  <  6:351898/149‑1 (MQ=255)   cTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGGTCATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACg                                                                                                                                                 <  1:84108/149‑1 (MQ=255)         cTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCt                                                                                                                                          <  5:354941/149‑1 (MQ=255)            ggCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCtt                                                                                                                                         <  7:120427/147‑1 (MQ=255)                 tGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTg                                                                                                                                  <  2:238597/149‑1 (MQ=255)                           gtcgtcGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                                                        >  7:313783/1‑149 (MQ=255)                                       cAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCg                                                                                                            >  5:384253/1‑149 (MQ=255)                                       cAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCg                                                                                                            >  4:47457/1‑149 (MQ=255)                                        aGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCgg                                                                                                           <  3:89130/149‑1 (MQ=255)                                               tctcACGGGCAAGCAGGTTGCTGGCCAGTTTTTCACGCTTGGTTGACGAGGTGATCACGG‑CATAGCCAAGTTGCATGGCCCAGGCCAGTGCAACCTTGGCGACGGTAGCCTTGTGCTTGGCTGCGATCTGGGCCAGTACCGGGTCttt                                                                                                     <  4:334162/145‑1 (MQ=255)                                               ggCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCtttt                                                                                                    <  8:195493/149‑1 (MQ=255)                                               ggCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGACCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCtttt                                                                                                    <  6:384253/149‑1 (MQ=255)                                                 ccACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAg                                                                                                  <  4:373749/149‑1 (MQ=255)                                                   aCGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCttt                                                                                                     >  3:334162/1‑144 (MQ=255)                                                      ggCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                                                        >  1:138098/1‑122 (MQ=255)                                                      ggCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCt                                                                                                                        <  2:138098/122‑1 (MQ=255)                                                           gCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCg                                                                                        >  2:224424/1‑149 (MQ=255)                                                             aGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTggcgg                                                                                                                              >  7:290904/1‑109 (MQ=255)                                                             aGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTggcgg                                                                                                                              <  8:290904/109‑1 (MQ=255)                                                              ggTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAg                                                                                     >  3:57467/1‑149 (MQ=255)                                                                ttGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGc                                                                                   <  1:148822/149‑1 (MQ=255)                                                                   cTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGGTTGGCGGCGATCTgg                                                                                                                      >  1:334036/1‑111 (MQ=255)                                                                   cTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTgg                                                                                                                      <  2:334036/111‑1 (MQ=255)                                                                      gCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAgg                                                                               <  1:224424/147‑1 (MQ=255)                                                                       ccAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCTCTTTGCCGTAGGCCAGGGTc                                                                            <  1:299297/149‑1 (MQ=255)                                                                        cAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACTGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCa                                                                           >  3:41029/1‑149 (MQ=255)                                                                           gTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCACAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATg                                                                         >  7:12056/1‑148 (MQ=255)                                                                                        gTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGt                                                           >  2:157029/1‑149 (MQ=255)                                                                                              gacgGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATccc                                                     <  8:313783/149‑1 (MQ=255)                                                                                                   gATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGt                                                 >  2:172633/1‑148 (MQ=255)                                                                                                     tCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTcc                                              <  1:172633/149‑1 (MQ=255)                                                                                                       aCGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCtt                                            <  8:12056/149‑1 (MQ=255)                                                                                                            cATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAg                                         >  5:240027/1‑148 (MQ=255)                                                                                                                gcccaggttgccctggcctgggccctgcaactgggcGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAcg                                    >  8:13792‑M2/37‑149 (MQ=255)                                                                                                                GCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAc                                     >  1:157029‑M1/1‑148 (MQ=255)                                                                                                                 CCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAAcgc                                   <  5:19634‑M1/149‑1 (MQ=255)                                                                                                                 CCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTCAAGGaacaa                                   >  4:45897‑M1/1‑147 (MQ=255)                                                                                                                 CCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTCAAGGAAc                                     <  3:45897‑M1/147‑1 (MQ=255)                                                                                                                  ccaggttgccctggcctgggccctgcaactgggcGACGGTAGCCTTGTGCTTGGCGGCGATCTgg                                                                                                                      <  8:184881‑M2/31‑1 (MQ=255)                                                                                                                  ccaggttgccctggcctgggccctgcaactgggcGACGGTAGCCTTGTGCTTGGCGGCGATCTgg                                                                                                                      >  7:184881‑M2/35‑65 (MQ=255)                                                                                                                  CCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTATGCCAGGGTCATGTACGAGGTCACGGt                                                           >  1:217684‑M1/1‑124 (MQ=255)                                                                                                                  CCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGt                                                           <  2:217684‑M1/124‑1 (MQ=255)                                                                                                                   CAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCgg                                 <  2:94857‑M1/149‑1 (MQ=255)                                                                                                                   CAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCACTTGTTCCTTGAGGAACGCgg                                 <  5:96629‑M1/149‑1 (MQ=255)                                                                                                                         cAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCt                           >  6:235998/1‑149 (MQ=255)                                                                                                                           gggCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTg                         <  5:235998/149‑1 (MQ=255)                                                                                                                            ggCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGc                        >  5:110713/1‑149 (MQ=255)                                                                                                                                  ggccaggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACTGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCt                  <  4:41029/149‑1 (MQ=255)                                                                                                                                   gccaggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTg                 >  2:20021/1‑149 (MQ=255)                                                                                                                                    ccaggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGc                <  1:20021/149‑1 (MQ=255)                                                                                                                                     caggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTc                               >  4:51998/1‑133 (MQ=255)                                                                                                                                     caggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTc                               <  3:51998/133‑1 (MQ=255)                                                                                                                                     caggGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGCa               <  6:240027/149‑1 (MQ=255)                                                                                                                                                 ggcGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGCAGATAGGGGCTg    <  6:19634‑M2/145‑1 (MQ=255)                                                                                                                                                  gcGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGCAGATAGGGGCTGAg  >  4:169469‑M2/3‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CGCTCCAGCTTGGCGATGCGTGCCATGTCGTCGGTGTCCAGCGTCAGGCCACGGGCAAGCAGGTTGCTGGCCAGGTTTTCACGCTTGGTCGACGACGGGATCACGG‑CATAGCCCAGTTGCAGGGCCCAGGCCAGGGCAACCTGGGCGACGGTAGCCTTGTGCTTGGCGGCGATCTGGGCCAGTACCGGGTCTTTTAGCACTTTGCCGTAGGCCAGGGTCATGTACGAGGTCACGGTGATCCCTTGTTCCTTGAGGAACGCGGTCAGCTTGCTGTTCTGCAGATAGGGGCTGAG  >  NC_002947/2701885‑2702177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.