New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4326128	58 (0.910)	3 (0.050)	3/246	NT	5.2%	coding (606/1335 nt)	pvdA	L‑ornithine 5‑monooxygenase
	?	NC_002947	= 4326163	54 (0.870)					coding (641/1335 nt)	pvdA	L‑ornithine 5‑monooxygenase

CGAATACAGCCGCCCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCAAGCCCGCCGACGACAGCC  >  NC_002947/4325990‑4326276                                                                                                                                           |                                                                                                                                                     cgAATACAGCCGCCCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTg                                                                                                                                            <  4:173848/149‑1 (MQ=255) cgAATACAGCCGCCCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTg                                                                                                                                            <  6:112998/149‑1 (MQ=255)        aGCCGCCCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGcc                                                                                                                                     >  5:102417/1‑149 (MQ=255)         gccgccCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGcc                                                                                                                                     >  3:245428/1‑148 (MQ=255)             ccccACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATgc                                                                                                                                <  4:231008/149‑1 (MQ=255)               ccACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGccc                                                                                                                                    >  8:341315/1‑143 (MQ=255)               ccACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGccc                                                                                                                                    <  7:341315/143‑1 (MQ=255)                 aCCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTgg                                                                                                                                           >  6:163631/1‑134 (MQ=255)                 aCCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTgg                                                                                                                                           <  5:163631/134‑1 (MQ=255)                   ccGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTg                                                                                                                                            >  1:325188/1‑131 (MQ=255)                   ccGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTg                                                                                                                                            <  2:325188/131‑1 (MQ=255)                    cGCTCGGTGGTGGTGGGGAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGc                                                                                                                         <  4:345915/149‑1 (MQ=255)                    cGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGc                                                                                                                         <  4:31213/149‑1 (MQ=255)                         ggtggtggtGGGCAGCGGTGGAACACGTAAAATTCCGTAAAACTTCGGCGCCTTAAAGGACTACCCGCGATTGTTCCACCACTCTAAGTACCTGAGCTGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGa                                                                                                                    <  1:269594/149‑1 (MQ=255)                               ggtggGCAGCGGTGGCACACCG‑AAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGatcacggcaatgcgcatgggcttgccagccgtgcacggcag                                                                                                             <  3:323947‑M1/149‑42 (MQ=255)                                gtggGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCAc                                                                                                                                                 >  5:395837/1‑113 (MQ=255)                                gtggGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCAc                                                                                                                                                 <  6:395837/113‑1 (MQ=255)                                gtggGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTc                                                                                                             <  8:277559/149‑1 (MQ=255)                                   ggCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATgc                                                                                                                                >  8:55149/1‑127 (MQ=255)                                   ggCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAg                                                                                                           <  6:421570/148‑1 (MQ=255)                                     cAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGc                                                                                                         >  4:315657/1‑148 (MQ=255)                                                   cGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAg                                                                                          <  3:315657/149‑1 (MQ=255)                                                    gAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAgg                                                                                         >  1:151792/1‑149 (MQ=255)                                                     aaaaTTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGcc                                                                                                                                     >  3:388379/1‑104 (MQ=255)                                                     aaaaTTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGcc                                                                                                                                     <  4:388379/104‑1 (MQ=255)                                                        attactgAAAACTTCGTCGCCTTCAAGGACGACCCGAGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGACGTGCACTGCTGGAAAGCCCATGCTCATTGCCTTTATCTGCTCAGGCCAGAGCGACGCCGAGGCGtt                                                                                     <  2:127398/143‑1 (MQ=255)                                                         ttCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTc                                                                                    <  3:77690/149‑1 (MQ=255)                                                             ggAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATc                                                                                 >  7:108118/1‑148 (MQ=255)                                                             ggAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATc                                                                                 >  3:333600/1‑148 (MQ=255)                                                              gAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAg                                                                                                                                       <  2:404432/93‑1 (MQ=255)                                                              gAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAg                                                                                                                                       >  1:404432/1‑93 (MQ=255)                                                               ctctcTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGAc                                                                              <  1:351127/145‑1 (MQ=255)                                                                    ttCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGAc                                                                              >  2:351127/1‑144 (MQ=255)                                                                      cGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAAc                                                                        <  8:108118/148‑1 (MQ=255)                                                                      cGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAAc                                                                        <  4:333600/148‑1 (MQ=255)                                                                        gcgcCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGAc                                                                     <  6:102417/149‑1 (MQ=255)                                                                          gcCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATc                                                                                 <  2:43368/135‑1 (MQ=255)                                                                          gcCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCACATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATc                                                                                 >  1:43368/1‑135 (MQ=255)                                                                             ttCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGatcacggcaatgcgcatgggcttgccagccgtgcacggcagtttg                                                                                                         >  6:89750‑M1/1‑63 (MQ=255)                                                                             ttCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGatcacggcaatgcgcatgggcttgccagccgtgcacggcagtttg                                                                                                         <  5:89750‑M1/108‑46 (MQ=255)                                                                             ttCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTa                                                                >  5:123333/1‑149 (MQ=255)                                                                              tCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGa                                                                      >  6:59279/1‑142 (MQ=255)                                                                              tCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGa                                                                      <  5:59279/142‑1 (MQ=255)                                                                               cAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATc                                                              >  3:274693/1‑149 (MQ=255)                                                                                        cccGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCgtcagtc                                                      >  1:102731/1‑148 (MQ=255)                                                                                                tgtTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGAc                                             <  4:314714/149‑1 (MQ=255)                                                                                                     caccacTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACa                                            <  2:196332/145‑1 (MQ=255)                                                                                                     caccacTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACa                                            >  1:196332/1‑145 (MQ=255)                                                                                                     caccacTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGAt                                        >  1:216654/1‑149 (MQ=255)                                                                                                      accacTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGAtt                                       <  4:274693/149‑1 (MQ=255)                                                                                                      accacTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGAtt                                       <  2:151792/149‑1 (MQ=255)                                                                                                           tctcAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTgcg                                  >  3:246650/1‑149 (MQ=255)                                                                                                             tcAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGcgcg                                >  3:395720/1‑149 (MQ=255)                                                                                                                       agcagcCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCt                      <  2:216654/149‑1 (MQ=255)                                                                                                                        gcagcCTGACCACACTGCCGTGCACGGCGTGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTc                     <  4:245428/149‑1 (MQ=255)                                                                                                                        gcagcCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTc                     <  2:102731/149‑1 (MQ=255)                                                                                                                            ccTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCAAGc                 <  6:123333/149‑1 (MQ=255)                                                                                                                                aCCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAg                                                   <  3:275687/111‑1 (MQ=255)                                                                                                                                aCCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAg                                                   >  4:275687/1‑111 (MQ=255)                                                                                                                                  cAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATcggcagtttggtcaggctgctcaggtactgagagtggtggaacactcgcgggtcgtccttgaa                                                    >  6:89750‑M2/1‑45 (MQ=255)                                                                                                                                  cAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATcggcagtttggtcaggctgctcaggtactgagagtggtggaacactcgcgggtcgtccttgaa                                                    <  5:89750‑M2/108‑64 (MQ=255)                                                                                                                                  cAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCaa                   >  4:138982/1‑141 (MQ=255)                                                                                                                                  cAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCaa                   <  3:138982/141‑1 (MQ=255)                                                                                                                                  cAAACTGCCGTGCACGGCTCGCAAGCCCATGCGCATTGCCGTGATCCGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGAGCGGCTCGGCCCTCAAGCccgcc            >  8:212686/1‑148 (MQ=255)                                                                                                                                    aaCTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCAAGCCCGCcgac         >  6:270618/1‑149 (MQ=255)                                                                                                                                      cTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATcggcagtttggtcaggctgctcaggtactgagagtggtggaacactcgcgggtcgtccttgaaggcgccgaagttttccggaatttcggtgtgccaccgctgcccacc       <  3:323947‑M2/149‑109 (MQ=255)                                                                                                                                           gTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCAAGCCCGCCGACGACAGcc  >  1:114859/1‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                     CGAATACAGCCGCCCCACCCGCTCGGTGGTGGTGGGCAGCGGTGGCACACCGAAAATTCCGGAAAACTTCGGCGCCTTCAAGGACGACCCGCGAGTGTTCCACCACTCTCAGTACCTGAGCAGCCTGACCAAACTGCCGTGCACGGCTGGCAAGCCCATGCGCATTGCCGTGATCGGCTCAGGCCAGAGCGCCGCCGAGGCGTTCATCGACCTCAACGACAGCTATCCGTCAGTCAAGGTCGACATGATTCTGCGCGGCTCGGCCCTCAAGCCCGCCGACGACAGCC  >  NC_002947/4325990‑4326276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.