New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4604411 =	58 (0.910)	5 (0.080)	4/238	NT	7.6%	coding (241/411 nt)	PP_4076	hypothetical protein
	?	NC_002947	4604450 =	67 (1.120)					coding (280/411 nt)	PP_4076	hypothetical protein

AGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGAC  >  NC_002947/4604265‑4604555                                                                                                                                                     |                                                                                                                                                 aGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACATCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAgcgc                                                                                                                                                >  2:378124/1‑149 (MQ=255) aGTGCCACCTCGAAACGTTGCTGAACGCTCGACAACGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACATCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAgcgc                                                                                                                                                >  2:378135/1‑149 (MQ=255)     cagtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGc                                                                                                                                                >  1:371268‑M1/145‑147 (MQ=255)      agtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCtt                                                                                                                                              >  2:345474‑M1/144‑148 (MQ=255)            gAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCt                                                                                                                                               >  4:371239/1‑139 (MQ=255)            gAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCt                                                                                                                                               <  3:371239/139‑1 (MQ=255)                          cGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTgcgcg                                                                                                                       <  4:48119/149‑1 (MQ=255)                               gCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCt                                                                                                                   >  8:206548/1‑148 (MQ=255)                                       ttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCg                                                                                                            >  2:220446‑M1/111‑149 (MQ=255)                                          tCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTAcc                                                                                                       >  1:325109/1‑149 (MQ=255)                                            ccAGAGCAGCCCCGAGCTGTGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCTACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTgc                                                                                                                          <  1:114244/128‑1 (MQ=255)                                            ccAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                      >  1:367736/1‑148 (MQ=255)                                             cAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCTAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGa                                                                                                    >  1:350295/1‑149 (MQ=255)                                               gagCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGAtt                                                                                                  <  5:170483/149‑1 (MQ=255)                                                       ccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGAtt                                                                                                  >  6:274012/1‑141 (MQ=255)                                                       ccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGAtt                                                                                                  <  5:274012/141‑1 (MQ=255)                                                       ccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGcc                                                                                          >  1:282343/1‑149 (MQ=255)                                                            cTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGtt                                                                                     <  7:206548/149‑1 (MQ=255)                                                               ggCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTg                                                                                    <  2:282343/147‑1 (MQ=255)                                                                gCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGaa                                                                                 >  8:37123/1‑149 (MQ=255)                                                                  cTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACt                                                                               <  7:37123/149‑1 (MQ=255)                                                                  cTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACt                                                                               <  6:371973/149‑1 (MQ=255)                                                                   tGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                      <  8:89268/125‑1 (MQ=255)                                                                   tGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                      >  7:89268/1‑125 (MQ=255)                                                                   gcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCttt                                                                                                                                             >  5:67242‑M1/83‑88 (MQ=255)                                                                   gcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCttt                                                                                                                                             <  6:67242‑M1/6‑1 (MQ=255)                                                                     cgcgACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCa                                                                            >  4:140813/1‑149 (MQ=255)                                                                      gcgACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCAt                                                                           <  1:83608/149‑1 (MQ=255)                                                                          cTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGt                                                                                                <  4:73414/124‑1 (MQ=255)                                                                          cTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGt                                                                                                >  3:73414/1‑124 (MQ=255)                                                                          cTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTc                                                                        >  1:254373/1‑148 (MQ=255)                                                                          cTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTc                                                                        <  2:254373/148‑1 (MQ=255)                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGACGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCAttt                                                                         >  1:89937/1‑147 (MQ=255)                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCAttt                                                                         >  5:313425/1‑146 (MQ=255)                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCAttt                                                                         <  6:313425/146‑1 (MQ=255)                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAg                                                                      >  6:23891/1‑149 (MQ=255)                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAg                                                                      >  1:10935/1‑149 (MQ=255)                                                                                ctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGc                                                                                                             <  8:74994‑M1/38‑1 (MQ=255)                                                                                ctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGc                                                                                                             >  7:74994‑M1/70‑107 (MQ=255)                                                                                cGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCAc                                                                                             >  2:193401/1‑121 (MQ=255)                                                                                cGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCAc                                                                                             <  1:193401/121‑1 (MQ=255)                                                                                   gCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACt                                                              <  7:29715/149‑1 (MQ=255)                                                                                    cATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCCGGTCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACt                                                              >  1:308159/1‑149 (MQ=255)                                                                                         cGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAgg                                                        <  5:23891/149‑1 (MQ=255)                                                                                            ctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGc                                                                                                             <  1:287265‑M1/38‑1 (MQ=255)                                                                                            ctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGc                                                                                                             >  2:287265‑M1/58‑95 (MQ=255)                                                                                              gcagcGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAg                                                   <  7:392681/149‑1 (MQ=255)                                                                                                       aCCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCaacaac                                          >  5:408658/1‑149 (MQ=255)                                                                                                        ccTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCATGTCAACAAcc                                         <  6:408658/149‑1 (MQ=255)                                                                                                            ctgcAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCTAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGc                                     <  2:350295/149‑1 (MQ=255)                                                                                                             tgcAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAgg                                      >  4:313194/1‑147 (MQ=255)                                                                                                              gcagcaAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAgg                                      >  8:230864/1‑146 (MQ=255)                                                                                                              gcagcaAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAgg                                      >  5:396028/1‑146 (MQ=255)                                                                                                                    aGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCACGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGt                             >  5:234289/1‑149 (MQ=255)                                                                                                                     gTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGtt                            >  2:214756/1‑149 (MQ=255)                                                                                                                     gTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGtt                            >  2:53799/1‑149 (MQ=255)                                                                                                                      tGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTg                           <  7:230864/149‑1 (MQ=255)                                                                                                                       gAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCa                                    <  6:247613/139‑1 (MQ=255)                                                                                                                       gAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCa                                    >  5:247613/1‑139 (MQ=255)                                                                                                                            gcCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAg                        >  8:377744/1‑147 (MQ=255)                                                                                                                            gcCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAg                        <  7:377744/147‑1 (MQ=255)                                                                                                                                   tCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGa                   <  2:233506/145‑1 (MQ=255)                                                                                                                                   tCC‑GCCGTACCCTCCAGCGCTTTGAACCCCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGa                   >  1:233506/1‑145 (MQ=255)                                                                                                                                       gccgTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg            >  1:31927/1‑149 (MQ=255)                                                                                                                                       gccgTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg            <  1:214756/149‑1 (MQ=255)                                                                                                                                       gccgTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg            <  2:308159/149‑1 (MQ=255)                                                                                                                                        ccgTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg            <  6:160332/148‑1 (MQ=255)                                                                                                                                        ccgTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg            >  5:160332/1‑148 (MQ=255)                                                                                                                                             cccTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAAc      <  1:53799/149‑1 (MQ=255)                                                                                                                                               cTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTaaa       >  7:370230/1‑146 (MQ=255)                                                                                                                                               cTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTaaa       <  8:370230/146‑1 (MQ=255)                                                                                                                                                tCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGt                                                 <  6:42400/103‑1 (MQ=255)                                                                                                                                                tCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGt                                                 >  5:42400/1‑103 (MQ=255)                                                                                                                                                  cAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGac  <  1:132892/148‑1 (MQ=255)                                                                                                                                                  cAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGa   <  3:313194/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 AGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAG‑CGCCGATATCC‑GCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGAC  >  NC_002947/4604265‑4604555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.