| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5099947 = | 51 (0.800) | 7 (0.140) | 7/204 | NT | 15.6% | intergenic (+33/+120) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| ? | NC_002947 | 5100029 = | 35 (0.680) | intergenic (+115/+38) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator | |||||
GAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGT > NC_002947/5099801‑5100092 | gatgggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttt > 7:324464‑M1/148‑148 (MQ=255) aaGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATcgc < 1:39731/149‑1 (MQ=255) tgggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaccaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTcg > 7:287015‑M1/146‑148 (MQ=255) gggggagtttcccattaggcgggccttgggcaaaagagtgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTcgc > 4:234058‑M1/145‑148 (MQ=255) gggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTcgc < 3:96844‑M1/4‑1 (MQ=255) ggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGa > 7:219221‑M1/144‑149 (MQ=255) ggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGa > 3:84941‑M1/144‑149 (MQ=255) cccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGGCCGGCGGGGCCCAATagcggcc > 1:187767/1‑145 (MQ=255) cccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGacac < 3:334778/149‑1 (MQ=255) cAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGacac > 6:86939/1‑147 (MQ=255) cccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGcc < 6:74378‑M1/15‑1 (MQ=255) cagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTc < 5:299997‑M1/2‑1 (MQ=255) cagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTc > 6:299997‑M1/133‑134 (MQ=255) cagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggagtagtggttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCg < 7:355907‑M1/16‑1 (MQ=255) gtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg > 6:199362‑M1/131‑143 (MQ=255) gtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg < 5:199362‑M1/13‑1 (MQ=255) gtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTc > 7:227081‑M1/131‑149 (MQ=255) tagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTcc > 8:202395‑M1/130‑149 (MQ=255) agtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTcc < 4:351272‑M1/20‑1 (MQ=255) gggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca < 7:26134‑M1/22‑1 (MQ=255) gggCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGc < 6:80684/134‑1 (MQ=255) gTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCGATCGCGCCACAAAGCCCCGccccccac > 2:388431/1‑143 (MQ=255) cGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTccc < 8:324644/139‑1 (MQ=255) cGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTccc > 7:324644/1‑139 (MQ=255) cGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTc < 5:207863/149‑1 (MQ=255) gCATGACCTACGATGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa < 2:261675/123‑1 (MQ=255) gCATGACCTACGAGGACTCCCAGGGCCAGAAGCTACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa > 1:261675/1‑124 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGc < 2:52932/119‑1 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGc > 1:52932/1‑119 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCagag > 5:417588/1‑149 (MQ=255) ggACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTCGAATCGGGGGCCCCGCGGGCCCCGAACGCGCCACAACGCCGCACCCACAAAAAATGCGCACACCCACAGcaccac > 2:357903/1‑146 (MQ=255) ccAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCCCTCCCACAGATAATGCGCTCACCCAGAGCACACCGTAtt > 2:112555/1‑148 (MQ=255) gacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAg > 6:235162‑M1/91‑115 (MQ=255) gCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:357903/149‑1 (MQ=255) ccAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTAt < 3:189347/141‑1 (MQ=255) ccAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCGGCGGGGCCCGATCGCGACACAAGGCCGCTCCCCCACATAATGCCCGCAGCCAGAGCACACCGGAttttctggg > 4:189347/1‑142 (MQ=255) attgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 8:26134‑M1/87‑149 (MQ=255) gAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGa < 5:86939/149‑1 (MQ=255) caacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGGTAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg > 4:203517‑M1/82‑143 (MQ=255) caacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGGTAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 3:203517‑M1/62‑1 (MQ=255) acaTTCTCGAATACCGGGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAGCtgt < 7:285809/140‑1 (MQ=255) acaTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCAGCGGGCCCCAATAGCGACACAAGGCCGCACCCACAGATAATTACCTCACCCACACCACAGCGTATTACCagtgacatcgg > 8:285809/1‑141 (MQ=255) caTTCTCGAATACCGCGTGATAGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGcc < 8:176138/149‑1 (MQ=255) ttCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATAGCGGCACCAGGCCGCGCCCCCACCTAAAGCGCGCCGCCCGCGCCCCCCGGATTTCCGGTGGGGGCgggcct > 3:264597/1‑145 (MQ=255) tgctggAATCCCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCtt < 8:385479/144‑1 (MQ=255) cGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTgtgt > 6:103962/1‑149 (MQ=255) gAATACCGCGTCATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtgtg < 7:53560/147‑1 (MQ=255) aTACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCACCCACAGATAAAGCGCGAAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCATGTGTagc > 6:354249/1‑149 (MQ=255) ccGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGa < 1:388431/148‑1 (MQ=255) cgcgTGATGGGGACCGGCTGCTCCAACGGCGGATCCCTTGGAAGCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGaaa < 3:144623/149‑1 (MQ=255) tcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCGAGAGCACAGCGTATTACCTGTGGGa > 5:12895‑M1/63‑127 (MQ=255) tcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCGAGAGCACAGCGTATTACCTGTGGGa < 6:12895‑M1/65‑1 (MQ=255) gTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGa < 6:417588/149‑1 (MQ=255) ggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGa < 4:341520/120‑1 (MQ=255) ggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGa > 3:341520/1‑120 (MQ=255) gctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt > 3:129702/1‑110 (MQ=255) gctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 4:129702/110‑1 (MQ=255) ctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCaa < 5:313498/138‑1 (MQ=255) ccAACGGCTGATACCTTGGAATCGGGGGCCCAGCGGGCCCCTATCGCGACACAAAGCCCCAACCACAGATAATGCGCTAAGCCACAGCCAAGCGTAATAACAGTGGGAGCGGCCATGTGTGGCGAAAGGAC‑AGCCAACCATTCCCAgct > 4:344355/1‑147 (MQ=255) ggCTGATACCTTGGTATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTcgc < 1:135544/118‑1 (MQ=255) ggCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCttt < 5:103962/149‑1 (MQ=255) tGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGa < 1:325888/122‑1 (MQ=255) gATACCTTGGAATCGGGGGCCCAGCGGGCCCCTATAGCGACACAAAGCCCCACCCACACAAAAATCCCTCAGCCAAACCACACCCGATTAACAGTGGGAGCGGCCGTGTGTGGCGAAAGGCC‑AGGAACCCAGTCCCAGGGTCTTTGAc > 2:132354/1‑148 (MQ=255) tcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 1:138815‑M1/32‑94 (MQ=255) tcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 2:138815‑M1/63‑1 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt < 2:303145/59‑1 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt > 1:303145/1‑59 (MQ=255) tCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATcc < 5:354249/149‑1 (MQ=255) ataggggCCCGCAGGGCCCCTATCGCGAAACAAGGCCGCACCCACAGAAAATGCCCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAA‑GGGAACCCAGTCCCAGGTTCTTTGACCAAAAACAAAtac > 4:96844/4‑147 (MQ=37) ccTGCGGGCCCCTATCGCGCCACAAGGCCCCGCCCCCCGCTAAATCCCAAAACCACAGCCCACCGGATTACCGGTGGGCGCGGCCGTGTGTGGCGAACGGCA‑AGCAAACCACGCCCACGGTCGTTGACCCACCACCAAAccgccccagt > 8:355907/1‑144 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACg < 8:308181/109‑1 (MQ=255) ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACg > 7:308181/1‑109 (MQ=255) gggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCATAGCTCAGCGTATTTGCTGTGCGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTaa < 1:132354/149‑1 (MQ=38) ggCCCCTATCGCGACAAAAGGCCGCTCCCACAGATAATGCGCTAAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAg < 7:142558/149‑1 (MQ=255) gCCCCTATCGCGACACAAGTCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 3:344355/149‑1 (MQ=255) gCCCCTATCGCGACACAAGGCGGCTCCCACAGATAATGCGCTCAGCCAGAGCAAAGCGTATTAACTGTGGTAGCGGACTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCttt < 5:172501/118‑1 (MQ=255) gCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCAAGAGCACAGCGTATTACCTGTGGGAGGGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc < 4:264597/149‑1 (MQ=255) cccTATCGCTACACAAGGCCGCTCCCACATATAATGCGCTCAGCCATAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 3:291388/149‑1 (MQ=255) cccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑AGGAACGCAGTCCCAGGTTCttt > 1:336536/1‑116 (MQ=255) cccTATCGCCACACACGGCCGCTCCCACATATAATGCGCTCAGCCAGAGCACAGCGTATTCCCTGGGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCttt < 2:336536/116‑1 (MQ=38) ccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 1:112555/149‑1 (MQ=255) ttTCGCGACACAAGGCCGCTCCCACAGGTAATACGCTGTGCTCTGGCTGAGCGCATTAACTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCACAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGt < 1:109700‑M1/146‑1 (MQ=255) | GAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGC‑ACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAC‑TGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGT > NC_002947/5099801‑5100092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |