New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5737021 =	69 (1.080)	4 (0.060)	4/248	NT	5.4%	coding (425/1674 nt)	hutU	urocanate hydratase
	?	NC_002947	5737071 =	72 (1.150)					coding (375/1674 nt)	hutU	urocanate hydratase

CCCAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGTGCGTTGCTGTGGG  >  NC_002947/5736876‑5737165                                                                                                                                                  |                                                                                                                                                   cccAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGc                                                                                                                                                 <  4:161992/149‑1 (MQ=255) cccAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGc                                                                                                                                                 <  6:232549/149‑1 (MQ=255) cccAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGc                                                                                                                                                 >  8:159847/1‑149 (MQ=255) cccAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGc                                                                                                                                                 >  2:102568/1‑149 (MQ=255)    agccagGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGa                                                                                                                                              >  8:389536/1‑149 (MQ=255)       cagGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           <  3:94541/149‑1 (MQ=255)       cagGGTCGCGGCCAGGGGCGGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTTCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           <  2:200834/149‑1 (MQ=255)                   cAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGc                                                                                                                               <  7:358434/149‑1 (MQ=255)                        gCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGGACCCACTTGCCTTGCAGGCTGCCGCCGTAGTGCGGGCGACCGGCTTCGCCGAAGGGTTCATAGGGGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCcg‑gcg                                                                                                                         <  5:40/149‑1 (MQ=255)                            ggCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCa                                                                                                                     >  8:165293/1‑149 (MQ=255)                               gccgccCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCt                                                                                                                  <  7:165293/149‑1 (MQ=255)                                  gccCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGc                                                                                                               <  2:33443/149‑1 (MQ=255)                                    ccATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           <  4:309967/120‑1 (MQ=255)                                    ccATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           >  3:309967/1‑120 (MQ=255)                                        gccgccCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           >  2:339919/1‑116 (MQ=255)                                        gccgccCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           <  1:339919/116‑1 (MQ=255)                                            cccAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCcg‑gcg                                                                                                                         >  3:199552/1‑129 (MQ=255)                                            cccAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCcg‑gcg                                                                                                                         <  4:199552/129‑1 (MQ=255)                                             ccAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGc                                                                                                    >  8:375587/1‑148 (MQ=255)                                              cAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATTCCCTGGCTGCCGa                                                                                                                                              <  6:47973/107‑1 (MQ=255)                                              cAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGa                                                                                                                                              >  5:47973/1‑107 (MQ=255)                                               aGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAg                                                                                                 <  7:115301/149‑1 (MQ=255)                                                  ccAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCGAGCGGTCATCTGGCCAT‑ACATCGCCAGGc                                                                                               <  1:231348/149‑1 (MQ=255)                                                  ccAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAg                                                                                                 >  7:259956/1‑146 (MQ=255)                                                   cccacagcaacgcaccgcgcgtgctgattgccaactccaacctggtgccacactgggccaactgggaacacttcaacgaactggacgccaagggcCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAt                                                                                                            >  3:340497‑M1/96‑135 (MQ=255)                                                   cccacagcaacgcaccgcgcgtgctgattgccaactccaacctggtgccacactgggccaactgggaacacttcaacgaactggacgccaagggcCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAt                                                                                                            <  4:340497‑M1/40‑1 (MQ=255)                                                      cGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTg                                                                                          <  7:21538/149‑1 (MQ=255)                                                           aGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTc                                                                                     <  8:203324/149‑1 (MQ=255)                                                             tACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTc                                                                                     >  8:43624/1‑147 (MQ=255)                                                               cccACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAg                                                                                  <  4:202324/148‑1 (MQ=255)                                                                ccACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           >  6:279636/1‑92 (MQ=255)                                                                ccACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGt                                                                                                                                           <  5:279636/92‑1 (MQ=255)                                                                ccACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGtt                                                                                >  5:13328/1‑149 (MQ=255)                                                                ccACTTGCCTTTCAGGCTGCCGCCGTAGTGATGGCGACCGGATTCGACGAAGGTTTCATAGGTGCCATGGCCGATGCCCTGGCTGCCGATGTAGATCCACATGCCG‑GCGGTCTAATGGCCAT‑CCATCGCACGGCCCTTGGCGTCAAGtt                                                                                >  8:343857/1‑149 (MQ=255)                                                                  aCTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGTTGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCg                                                                              >  5:314804/1‑149 (MQ=255)                                                                    ttGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGc                                                                                                               <  6:378651/115‑1 (MQ=255)                                                                    ttGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGc                                                                                                               >  5:378651/1‑115 (MQ=255)                                                                      gCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTg                                                                           <  6:37946/148‑1 (MQ=255)                                                                       ccTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGaa                                                                         <  7:389536/149‑1 (MQ=255)                                                                       ccTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGaa                                                                         <  7:159847/149‑1 (MQ=255)                                                                       ccTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGaa                                                                         <  6:13328/149‑1 (MQ=255)                                                                        cTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAg                                                                        >  8:313516/1‑149 (MQ=255)                                                                         tttCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATc                                                                                                                   <  4:246882/106‑1 (MQ=255)                                                                         tttCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATc                                                                                                                   >  3:246882/1‑106 (MQ=255)                                                                         tttCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTgg                                                                                                                >  1:80493/1‑109 (MQ=255)                                                                         tttCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTgg                                                                                                                <  2:80493/109‑1 (MQ=255)                                                                         tttCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAgt                                                                       >  1:218735/1‑149 (MQ=255)                                                                           tCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGaa                                                                         <  3:47834/145‑1 (MQ=255)                                                                           tCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGaa                                                                         >  4:47834/1‑145 (MQ=255)                                                                            cAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGtt                                                                    >  1:99206/1‑149 (MQ=255)                                                                             aGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGtt                                                                    <  8:40073/148‑1 (MQ=255)                                                                              ggCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTcc                                                                  >  6:172991/1‑149 (MQ=255)                                                                                   ccgccgTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAg                                                               <  5:172991/147‑1 (MQ=255)                                                                                       cgTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGcc                                                         <  4:201520/149‑1 (MQ=255)                                                                                           gTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGa                                                                                                                                        <  1:211660/68‑1 (MQ=255)                                                                                           gTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGa                                                                                                                                        >  2:211660/1‑68 (MQ=255)                                                                                                    aCCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAt                                                                                                            >  1:82755/1‑86 (MQ=255)                                                                                                    aCCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAt                                                                                                            <  2:82755/86‑1 (MQ=255)                                                                                                      cGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAg                                                                        >  5:258078/1‑119 (MQ=255)                                                                                                      cGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAg                                                                        <  6:258078/119‑1 (MQ=255)                                                                                                      cGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAgg                                          >  2:105740/1‑149 (MQ=255)                                                                                                       ggCTTCGACGAAGGTTTCATAGGTGCCCTGCACGATGCCCTGGCGGCCGATGTAGATCCAGCTGCCG‑GCTGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGt                                         <  6:314811/149‑1 (MQ=255)                                                                                                          ttCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTg                                       >  6:415133/1‑148 (MQ=255)                                                                                                             gacgaAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTg                                       >  7:115823/1‑145 (MQ=255)                                                                                                             gacgaAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTg                                       <  8:115823/145‑1 (MQ=255)                                                                                                               cgaAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTg                                 <  7:375587/149‑1 (MQ=255)                                                                                                                     tttCATAGGTGCCCTGGACGATGCCCTGGCTGCCGTTGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATc                           <  6:314804/149‑1 (MQ=255)                                                                                                                         aTAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCa                       >  7:251242/1‑149 (MQ=255)                                                                                                                          ttcaacgaactggacgccaagggcCTGCCGTTGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGc                                                                                                    <  1:33667‑M1/47‑1 (MQ=255)                                                                                                                          ttcaacgaactggacgccaagggcCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGc                                                                                                    >  2:33667‑M1/25‑71 (MQ=255)                                                                                                                                 ccTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCAt                                                                                                                    <  8:191977/49‑1 (MQ=255)                                                                                                                                 ccTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCAt                                                                                                                    >  7:191977/1‑49 (MQ=255)                                                                                                                                 ccTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGt               <  7:43624/149‑1 (MQ=255)                                                                                                                                   tGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCAcgcgc                  >  3:349816/1‑144 (MQ=255)                                                                                                                                   tGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCAcgcgc                  <  4:349816/144‑1 (MQ=255)                                                                                                                                        gATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGTGCGTTGc        >  5:130899/1‑149 (MQ=255)                                                                                                                                            cccTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGTGCGTTGCtgt     <  7:313516/148‑1 (MQ=255)                                                                                                                                             ccTGTCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCAcgcg                   <  5:262710/133‑1 (MQ=255)                                                                                                                                             ccTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCATGACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGTGCGTTGCtgtg    >  1:291835/1‑149 (MQ=255)                                                                                                                                             ccTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTg                                 >  4:260/1‑119 (MQ=255)                                                                                                                                             ccTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTg                                 <  3:260/119‑1 (MQ=255)                                                                                                                                             ccTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGACAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGCCACCAGGTTGGAGTTTGAAATCAGCAcgcg                   >  6:262710/1‑133 (MQ=255)                                                                                                                                              cTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGATCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGGTGGAGATGGCAATCACCACGCCCGGTGCGTAGCtgtgcg  >  8:159153/1‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCCAGCCAGGGTCGCGGCCAGTGGCTGGGCGCCGCCCATGCCGCCCAGGCCAGCGGTGAGTACCCACTTGCCTTTCAGGCTGCCGCCGTAGTGCTGGCGACCGGCTTCGACGAAGGTTTCATAGGTGCCCTGGACGATGCCCTGGCTGCCGATGTAGATCCAGCTGCCG‑GCGGTCATCTGGCCAT‑ACATCGCCAGGCCCTTGGCGTCCAGTTCGTTGAAGTGTTCCCAGTTGGCCCAGTGTGGCACCAGGTTGGAGTTGGCAATCAGCACGCGCGGTGCGTTGCTGTGGG  >  NC_002947/5736876‑5737165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.