New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5816842	50 (0.780)	9 (0.150)	8/244	NT	21.2%	intergenic (+28/+101)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816927	19 (0.310)					intergenic (+113/+16)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

TCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTC  >  NC_002947/5816694‑5816973                                                                                                                                                           |                                                                                                                                    tCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCC                                                                                                                                     >  2:362803‑M1/1‑149 (MQ=255)       ccGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTcgc                                                                                                                               <  2:64203/149‑1 (MQ=255)                        gTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCca                                                                                                              >  1:251790/1‑149 (MQ=255)                        gTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCCGGCCCCCCCCCGcccc                                                                                                              >  2:154017/1‑148 (MQ=255)                         tATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCcac                                                                                                             <  2:314148/149‑1 (MQ=255)                          aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTccc                                                                                                               <  7:74057/146‑1 (MQ=255)                          aTCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTccc                                                                                                               >  8:74057/1‑146 (MQ=255)                           tCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCcaca                                                                                                            <  1:362803/148‑1 (MQ=255)                           tCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                           >  7:355349/1‑149 (MQ=255)                             gACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                          <  3:54162/148‑1 (MQ=255)                                acCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgc                                                                                                      <  2:98500/149‑1 (MQ=255)                                  cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                       <  6:376643/146‑1 (MQ=255)                                  cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                       >  5:376643/1‑146 (MQ=255)                                   ttGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGcgcg                                                                                                   >  7:75090/1‑149 (MQ=255)                                      aGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                 <  2:94877/148‑1 (MQ=255)                                      aGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCg                                                                                                <  1:254529/149‑1 (MQ=255)                                        cAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGct                                                                                              >  7:366164/1‑149 (MQ=255)                                         aaGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGATTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcg                                                                                             <  8:326829‑M1/149‑41 (MQ=255)                                           gCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCtctc                                                                                           >  5:247185/1‑149 (MQ=255)                                                  tGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgagcgcgagagc                                                                                    >  1:396875‑M1/1‑100 (MQ=255)                                                  tGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCCCGCCCGCTCCCACAGGTAGCCCGGCGCTCTcgcgcg                                                                                      >  6:342396/1‑147 (MQ=255)                                                    gCAGAAGCACTACGTGGTGGCCAAGTGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCCCGCCCGCGCCCCCACGTAGCCCGGCCCTCgcgcgcgccg                                                                                   >  8:189422/1‑146 (MQ=255)                                                    gCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGc                                                                                                                           <  6:188048/108‑1 (MQ=255)                                                    gCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGc                                                                                                                           >  5:188048/1‑108 (MQ=255)                                                        aaGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGc                                                                                                                           <  3:349093/104‑1 (MQ=255)                                                        aaGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGc                                                                                                                           >  4:349093/1‑104 (MQ=255)                                                            aCTAGGTGGGGGCAAAGCGGGTGCTGCCGAAATAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTTATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCcttcgcgggcacgcccgctcccacaggtatgttagctgcgcgcgagagcgacgcgctac                                                                          <  2:396875‑M1/149‑60 (MQ=255)                                                              tACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacct                                                                        >  6:382994‑M1/1‑88 (MQ=255)                                                              tACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                          >  3:287674/1‑147 (MQ=255)                                                                 gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                     <  8:355349/149‑1 (MQ=255)                                                                  tggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                    <  3:93544‑M1/149‑66 (MQ=255)                                                                  tggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                    <  4:287674/149‑1 (MQ=255)                                                                  tggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTACCCCAGGTAGCCCGTCGCTCTCCCGCGCAGCTCCCAGACCAGTgg                                                                    >  3:321668/1‑149 (MQ=255)                                                                    gtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACT‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGa                                                                  <  2:273729/149‑1 (MQ=255)                                                                    gtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCtctc                                                                                           <  8:315895/124‑1 (MQ=255)                                                                    gtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                    >  7:70381/1‑147 (MQ=255)                                                                    gtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                    <  8:70381/147‑1 (MQ=255)                                                                     tggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAg                                                                 >  6:130446/1‑149 (MQ=255)                                                                      ggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagc                                                                <  5:382994‑M1/149‑70 (MQ=255)                                                                       gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGc                                                                <  5:130446/148‑1 (MQ=255)                                                                         cAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                       <  8:385048/107‑1 (MQ=255)                                                                         cAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                       >  7:385048/1‑107 (MQ=255)                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCTGCAAAGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                  <  4:28726‑M1/149‑68 (MQ=255)                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCTGCAAAGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                  <  4:203662‑M1/149‑68 (MQ=255)                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgc                                                            <  6:247185/149‑1 (MQ=255)                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgc                                                            <  5:15514/149‑1 (MQ=255)                                                                                 tgctgcCGAAAGAGCAGCAGCGGAGTCTGGCCAAGCTTTAAGCTTATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCTTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCcg                                                     <  2:251790/149‑1 (MQ=255)                                                                                    tgcCTAACGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTTATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACGTGGGGGAGCGGGCGCGCCCGCGa                                                  <  6:9790/149‑1 (MQ=38)                                                                                     gcCGAAAGAGCAGCAGCGGAGTCTGGCCAAGCGTTACGCTGATCGGCGCTCTCCGGTCCC‑‑‑‑‑‑GGCCCctttgcgggcgcgcccgctcccaccggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgtgcccgcgaa                                                 <  1:234702‑M1/149‑85 (MQ=255)                                                                                             agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCtt                                         <  8:386604/149‑1 (MQ=255)                                                                                               cagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                             <  3:308554/111‑1 (MQ=255)                                                                                               cagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                             >  4:308554/1‑111 (MQ=255)                                                                                                     cTGAGTCTGGCCAAGCGTGAAGCTGATCGGCGCTATCCGGGACC‑‑‑‑‑‑GGCCCCTTCGCTGGCACGCCCGCGCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGGGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                 <  3:355144/149‑1 (MQ=38)                                                                                                       gAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGtact                               <  5:342396/149‑1 (MQ=255)                                                                                                              gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCgg                                                              >  5:282271/1‑111 (MQ=255)                                                                                                              gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCgg                                                              <  6:282271/111‑1 (MQ=255)                                                                                                                  aGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTg                    <  7:189422/149‑1 (MQ=255)                                                                                                                   gCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                   <  3:90602/149‑1 (MQ=255)                                                                                                                               tCGGCTCTATCCTGTACC‑‑‑‑‑‑CGCCCCTTCGCGGGCACGCACGCTCCCTCCGGTTGCTCGTGGCTCTCGCGCGCAGCCCTCATACCTGTCGGAGCGGGCTCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCt       <  6:382162/149‑1 (MQ=255)                                                                                                                                    gcTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTc  <  8:75090/149‑1 (MQ=255)                                                                                                                                                       ggCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGtac                                <  7:295296/106‑1 (MQ=255)                                                                                                                                                        gCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgcgcg                                                                                      <  6:331121/51‑1 (MQ=255)                                                                                                                                                        gCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgcgcg                                                                                      >  5:331121/1‑51 (MQ=255)                                                                                                                                                           |                                                                                                                                    TCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACC‑‑‑‑‑‑GGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTC  >  NC_002947/5816694‑5816973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.