New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 301439 =68 (1.060)3 (0.050) 3/242 NT 5.0% coding (358/741 nt) ompR two‑component system DNA‑binding response regulator
?NC_002947 301496 = 49 (0.800)coding (415/741 nt) ompR two‑component system DNA‑binding response regulator

CGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGTTGACCC  >  NC_002947/301348‑301643
                                                                                                                                                    |                                                                                                                                                    
tggtgagcatgtgcacttcgttgccacgcttgagctcgcgggtggccagcgacagctcatagtcgccgaaggtgaccgactcgtcctcgctGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCa                                                                                                                                                      >  3:151782‑M1/92‑149 (MQ=255)
  ccAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGc                                                                                                                                                    <  7:84435/149‑1 (MQ=255)
   cAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGc                                                                                                                                                    >  7:391475/1‑148 (MQ=255)
    aaGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGa                                                                                                                                                  <  6:374460/149‑1 (MQ=255)
          gacgaGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                                                              >  5:324679/1‑147 (MQ=255)
          gacgaGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                                                              >  1:334040/1‑147 (MQ=255)
            cgaGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGt                                                                                                                                          >  3:90341/1‑149 (MQ=255)
               ttcgttgccacgcttgagctcgcgggtggccagcggacagctcatagtcgccgaaggtgaccgactcgtcctcgctGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGc                                                                                                                                                    <  1:55025‑M1/60‑1 (MQ=255)
               gCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCgg                                                                                                                                       <  3:362262/149‑1 (MQ=255)
                ttcgttgccacgcttgagctcgcgggtggccagcgacagctcatagtcgccgaaggtgaccgactcgtcctcgctGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGc                                                                                                                                                    >  2:55025‑M1/76‑135 (MQ=255)
                  cAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCa                                                                                                                                    <  3:34600/149‑1 (MQ=255)
                   aGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCAc                                                                                                                                   <  8:391475/149‑1 (MQ=255)
                     ccGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGAACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTc                                                                                                                                     <  8:47973/145‑1 (MQ=255)
                     ccGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGAACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTc                                                                                                                                     >  7:47973/1‑145 (MQ=255)
                       gCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGa                                                                                                                                               <  6:398229/133‑1 (MQ=255)
                       gCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGa                                                                                                                                               >  5:398229/1‑133 (MQ=255)
                             aGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGa                                                                                                                                            >  7:39277/1‑130 (MQ=255)
                             aGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGa                                                                                                                                            <  8:39277/130‑1 (MQ=255)
                                  cTGGAGCTGGGCGCCGACGACTTCCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTAt                                                                                                                      >  7:260514/1‑147 (MQ=255)
                                  cTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGa                                                                                                                    <  8:244631/149‑1 (MQ=255)
                                       gCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGt                                                                                                               <  5:197475/149‑1 (MQ=255)
                                        cTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGt                                                                                                               <  2:197103/148‑1 (MQ=255)
                                         tGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCg                                                                                                            >  4:86048/1‑149 (MQ=255)
                                           ggCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                                                              <  6:187876/114‑1 (MQ=255)
                                           ggCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGAc                                                                                                                                              >  5:187876/1‑114 (MQ=255)
                                             cgcCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTgg                                                                                                        <  3:29257/149‑1 (MQ=255)
                                             cgcCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTgg                                                                                                        >  7:213130/1‑149 (MQ=255)
                                                    gacTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCcg                                                                                                 >  4:268598/1‑149 (MQ=255)
                                                               cAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGc                                                                                      <  2:334040/149‑1 (MQ=255)
                                                                 aGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGa                                                                                              >  1:45566/1‑139 (MQ=255)
                                                                 aGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGa                                                                                              <  2:45566/139‑1 (MQ=255)
                                                                  gCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTg                                                                                                         <  7:304943/127‑1 (MQ=255)
                                                                  gCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTg                                                                                                         >  8:304943/1‑127 (MQ=255)
                                                                  gCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGCGCTCCAGCggg                                                                                   >  4:65932/1‑147 (MQ=255)
                                                                     gTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGa                                                                                                                    >  2:5723/1‑114 (MQ=255)
                                                                     gTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGa                                                                                                                    <  1:5723/114‑1 (MQ=255)
                                                                      ttCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCaa                                                                               <  3:86048/149‑1 (MQ=255)
                                                                            ccGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTc                                                                                                                               <  1:279278/96‑1 (MQ=255)
                                                                            ccGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTc                                                                                                                               >  2:279278/1‑96 (MQ=255)
                                                                            ccGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGt                                                                         >  4:317168/1‑149 (MQ=255)
                                                                            ccGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGt                                                                         <  3:65932/149‑1 (MQ=255)
                                                                                aCGAACTGCTGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGcac                                                                     <  8:260514/149‑1 (MQ=255)
                                                                                  gAACTGATGGCCCGGGTCAAGGCGGTGCAGCGTCGTCAGGCGCCGAGCGTGCCGGGAGCGCCGGGCAGCGAGGACGAGTCGGTCACCATCGGCGACTATGAGCTGTCGATGGCCATCCGCGAGCTCAAGCGTGGCAACGAAGTGCACAt                                                                   >  5:89221/1‑149 (MQ=255)
                                                                                        gctgcccggcgcacccggcacgctcggcgcctgacgacgcagcaccgccttgacccgggcAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGaa                                                                           <  1:55025‑M2/76‑1 (MQ=255)
                                                                                        gctgcccggcgcacccggcacgctcggcgcctgacgacgcagcaccgccttgacccgggcAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGaa                                                                           >  2:55025‑M2/61‑135 (MQ=255)
                                                                                        aTGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTc                                                               <  2:118782/147‑1 (MQ=255)
                                                                                          tgcccggcgcacccggcacgctcggcgcctgacgacgcagcaccgccttgacccgggcAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTcacca                                                           >  3:151782‑M2/59‑149 (MQ=255)
                                                                                             CCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCg                                                        <  6:361378‑M1/149‑1 (MQ=255)
                                                                                                  tCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAg                                                   >  8:284147/1‑149 (MQ=255)
                                                                                                  tCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAg                                                   >  2:197709/1‑149 (MQ=255)
                                                                                                    aaGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGGGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGt                                                  <  5:361378/148‑1 (MQ=255)
                                                                                                      ggCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCg                                               <  1:197709/149‑1 (MQ=255)
                                                                                                           tgctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGa                                                    <  4:272212/139‑1 (MQ=255)
                                                                                                           tgctgcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGa                                                    >  3:272212/1‑139 (MQ=255)
                                                                                                               gcGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTc                                       >  8:69434/1‑148 (MQ=255)
                                                                                                                 gtcgtcAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAg                                    >  1:412296/1‑149 (MQ=255)
                                                                                                                  tcgtcAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAgg                                   <  7:69434/149‑1 (MQ=255)
                                                                                                                              gtgCGGGCCGGGGGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACACGCGAGCTCAAGCTTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGc                       <  4:285545/147‑1 (MQ=255)
                                                                                                                                        ggTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCcgc               >  1:362271/1‑147 (MQ=255)
                                                                                                                                            cgcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCg         <  6:324679/149‑1 (MQ=255)
                                                                                                                                            cgcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCg         <  7:284147/149‑1 (MQ=255)
                                                                                                                                             gcCGGGCAGCGAGGACGAGTCGGTCACCTTGGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGt        >  1:33057/1‑149 (MQ=255)
                                                                                                                                             gcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCg         <  7:352574/148‑1 (MQ=255)
                                                                                                                                             gcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCg         >  8:352574/1‑148 (MQ=255)
                                                                                                                                             gcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGt        >  5:96821/1‑149 (MQ=255)
                                                                                                                                             gcCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGt        >  7:114743/1‑149 (MQ=255)
                                                                                                                                              ccgggcAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGtt       <  3:395465‑M2/143‑1 (MQ=255)
                                                                                                                                                   cAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGTTGAccc  <  8:213130‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CGCCAAGGGCGACGAGCTCAGCCGCATCAAGGGCCTGGAGCTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAACCCGGACGAACTGATGGCCCGGGTCAAGGCGGTGCTGCGTCGTCAGGCGCCGAGCGTGCCGGGTGCGCCGGGCAGCGAGGACGAGTCGGTCACCTTCGGCGACTATGAGCTGTCGCTGGCCACCCGCGAGCTCAAGCGTGGCAACGAAGTGCACATGCTCACCACCGGCGAGTTCGCTGTGCTCAAGGCTCTGGTGATGCACGCCCGCGAGCCGTTGACCC  >  NC_002947/301348‑301643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.