New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2505327 =	43 (0.670)	3 (0.050)	3/240	NT	7.5%	coding (1114/1146 nt)	yliI	aldose sugar dehydrogenase
	?	NC_002947	2505368 =	33 (0.550)					intergenic (+9/‑33)	yliI/PP_2199	aldose sugar dehydrogenase/hypothetical protein

ACAAGGTGGTGCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTT  >  NC_002947/2505220‑2505514                                                                                                                                                      |                                                                                                                                                   gcctgggcagggtcagcaacgtagccccgagtgctcagggcgtgctggtagcgggtttggggggcgagggccatgccgcattctcaccgactgtcaccctcggtgcaGGCGCGCTACTCAAGGGCGGCCT‑GGCCGACTGACGCGCGCCt                                                                                                                                                    >  7:269160‑M1/108‑149 (MQ=255)           gCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAggg                                                                                                                                          <  6:134003/149‑1 (MQ=255)            cACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAggg                                                                                                                                          <  3:271707/148‑1 (MQ=255)            cACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGGGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCTGGGCCGACTGACGCGCGCCTGCACCGAggg                                                                                                                                          <  1:218916/149‑1 (MQ=255)             aCGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCATCGAGGGt                                                                                                                                         >  4:184618/1‑148 (MQ=255)               gAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGa                                                                                                                                       >  8:292649/1‑148 (MQ=255)                aaGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACa                                                                                                                                     <  5:212739/149‑1 (MQ=255)                     cGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCgg                                                                                                                                <  3:117489/149‑1 (MQ=255)                       gTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGt                                                                                                                                         <  8:86710/138‑1 (MQ=255)                       gTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGt                                                                                                                                         >  7:86710/1‑138 (MQ=255)                               gTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCg                                                                                                                      <  7:292649/149‑1 (MQ=255)                                              gTATCCGTGATGTGCGGCTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGAcc                                                                                                       <  6:44504/149‑1 (MQ=255)                                                    gTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCaaa                                                                                                 >  6:33884/1‑149 (MQ=255)                                                     tGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAAc                                                                                                <  4:153754/149‑1 (MQ=255)                                                     tGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAAc                                                                                                <  6:359501/149‑1 (MQ=255)                                                     tGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAAc                                                                                                >  5:359501/1‑149 (MQ=255)                                                                  gggCCAGATGGTTACCTTTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCaa                                                                                   <  8:122755/149‑1 (MQ=255)                                                                  gggCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCa                                                                                    <  1:167568/148‑1 (MQ=255)                                                                                 cTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCATCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCgg                                                                    <  3:184618/149‑1 (MQ=255)                                                                                 cTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGATGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCgg                                                                    >  6:118626/1‑149 (MQ=255)                                                                                   gtatgtaCTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCgggg                                                                  >  7:121117/1‑149 (MQ=255)                                                                                           tGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTg                                                          >  5:244039/1‑149 (MQ=255)                                                                                              ccGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTg                                                       <  5:33884/149‑1 (MQ=255)                                                                                               cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGa                                                      >  5:51765/1‑149 (MQ=255)                                                                                               cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGa                                                      <  8:121117/149‑1 (MQ=255)                                                                                               cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGa                                                      >  7:130171/1‑149 (MQ=255)                                                                                               cGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGa                                                      >  5:45772/1‑149 (MQ=255)                                                                                                      aaGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGa                                                                                                                                       <  2:354283/61‑1 (MQ=255)                                                                                                        ggATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGa                                                                            >  5:100417/1‑118 (MQ=255)                                                                                                        ggATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGa                                                                            <  6:100417/118‑1 (MQ=255)                                                                                                         gATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAg                                            >  3:303858/1‑149 (MQ=255)                                                                                                            aggcgcgcgtcagtcggccaggccgcccttgagtagcgcgccTGCACCGAGGGTGACAGTCGGTGAGAATGCGGCATGGCCCTCGCCCCCCAAACCCGCTACCAGCACGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGc                                          >  7:269160‑M2/43‑149 (MQ=255)                                                                                                              gcgcgcgtcagtcggccaggccgaccttgagtagcgcgccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGccc                                        >  7:101483‑M2/41‑149 (MQ=255)                                                                                                               cgcgcgtcagtcggccaggccgaccttgagtagcgcgccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCcg                                       >  8:7300‑M2/40‑149 (MQ=255)                                                                                                                       cAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCgtcgtc                                >  6:3894/1‑147 (MQ=255)                                                                                                                           gTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGTTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGcc                          <  5:118626/149‑1 (MQ=255)                                                                                                                           gTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGcc                          <  4:303858/149‑1 (MQ=255)                                                                                                                                          cTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAg                                            <  2:354223/117‑1 (MQ=255)                                                                                                                                          cTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAg                                            >  1:354223/1‑117 (MQ=255)                                                                                                                                           tGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCACTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc           >  6:280649/1‑149 (MQ=255)                                                                                                                                             aCGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTc           <  8:130171/147‑1 (MQ=255)                                                                                                                                                  cgccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTccc    <  7:7300‑M2/145‑1 (MQ=255)                                                                                                                                                  cgccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTccc    <  5:3894‑M2/145‑1 (MQ=255)                                                                                                                                                    ccTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCtt  >  4:16110‑M2/3‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                   ACAAGGTGGTGCACGAAGAGCGGTTGCTCGGTGACCTGAAGGCGCGTATCCGTGATGTGCGGGTGGGGCCAGATGGTTACCTGTATGTACTGACCGATGACAAGGATGGCGCGCTACTCAAGGTCGGCCT‑GGCCGACTGACGCGCGCCTGCACCGAGGGTGACAGTCGGGTAGAATGCGGCATGGCCCTCGACCCCCAAACCCTCTACCAGCAAGCCCTGAGCACTCGGGGCTACGTTGCTGACCCTGCCCAGGCCCGCGTCGTCGAGGCCTTGCAAGCCTGCTTCCAGTCCCTT  >  NC_002947/2505220‑2505514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.