New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2971564	54 (0.840)	3 (0.050)	3/242	NT	5.5%	coding (1903/2391 nt)	PP_2599	chemotaxis sensory transducer family protein
	?	NC_002947	= 2971584	52 (0.850)					coding (1923/2391 nt)	PP_2599	chemotaxis sensory transducer family protein

TTGCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGATGAA  >  NC_002947/2971438‑2971727                                                                                                                                                   |                                                                                                                                                ttGCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcg                                                                                                                                               <  5:107844‑M2/149‑3 (MQ=255) ttGCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcg                                                                                                                                               <  7:146595‑M2/149‑3 (MQ=255)   gCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgc                                                                                                                                              >  2:256447‑M2/1‑145 (MQ=255)   gCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgc                                                                                                                                              >  2:268334‑M2/1‑145 (MQ=255)     tGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgccgt                                                                                                                                           <  7:173460‑M2/149‑7 (MQ=255)       gCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgccgt                                                                                                                                           >  4:119737‑M2/1‑141 (MQ=255)       gCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgccctga                                                                                                                                         >  8:146595‑M2/1‑141 (MQ=255)       gCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTgg                                                                                                                                         >  2:258101/1‑149 (MQ=255)         cGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgcc                                                                                                                                             >  1:387641‑M2/1‑139 (MQ=255)         cGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgcc                                                                                                                                             <  2:387641‑M2/143‑5 (MQ=255)                cccGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGctgac                                                                                                                                <  3:167173/149‑1 (MQ=255)                   gAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGctgactga                                                                                                                             <  8:47740/149‑1 (MQ=255)                       aCTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACg                                                                                                                           >  3:27799/1‑147 (MQ=255)                        cTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACAGGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACgaag                                                                                                                        <  8:76492/149‑1 (MQ=255)                         tGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACgaag                                                                                                                        >  2:111236/1‑148 (MQ=255)                            gTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACgaa                                                                                                                         >  3:385283/1‑144 (MQ=255)                            gTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACgaa                                                                                                                         <  4:385283/144‑1 (MQ=255)                                    gggCACCCGCACGCCGCCGGTGGTGAAGCACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCaa                                                                                                              <  5:349771/147‑1 (MQ=255)                                            gCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGaa                                                                                                    <  4:27799/149‑1 (MQ=255)                                                gccgccGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGc                                                                                                                   >  6:236558/1‑130 (MQ=255)                                                gccgccGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGc                                                                                                                   <  5:236558/130‑1 (MQ=255)                                                        tggtgAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCaa                                                                                                        <  7:366686/133‑1 (MQ=255)                                                        tggtgAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCaa                                                                                                        >  8:366686/1‑133 (MQ=255)                                                         ggtgAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTgg                                                                                                                                         >  2:368598/1‑99 (MQ=255)                                                         ggtgAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTgg                                                                                                                                         <  1:368598/99‑1 (MQ=255)                                                         ggtgAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGa                                                                                       <  1:258101/149‑1 (MQ=255)                                                             aaGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACcat                                                                                   >  1:209836/1‑149 (MQ=255)                                                                      ccGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGc                                                                           >  4:145170/1‑148 (MQ=255)                                                                      ccGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACATGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCt                                                                          >  4:75649/1‑149 (MQ=255)                                                                        gcgTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGAACATCATCATGCt                                                                          >  1:199723/1‑147 (MQ=255)                                                                              cATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCAc                                                                  >  4:119581/1‑149 (MQ=255)                                                                                   gggggTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCg                                                             >  5:338298/1‑149 (MQ=255)                                                                                      ggTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTc                                                          <  2:199723/149‑1 (MQ=255)                                                                                       gTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTcc                                                         <  5:116360/149‑1 (MQ=255)                                                                                       gTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTcc                                                         >  6:116360/1‑149 (MQ=255)                                                                                            aCATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCcgc                                                      >  8:333039/1‑147 (MQ=255)                                                                                            aCATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCcgc                                                      <  7:333039/147‑1 (MQ=255)                                                                                            aCATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGt                                                    >  2:413294/1‑149 (MQ=255)                                                                                             cATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTc                                                   <  8:173460/149‑1 (MQ=255)                                                                                               tGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAg                                                 <  3:145170/149‑1 (MQ=255)                                                                                                gCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGc                                                >  8:337490/1‑149 (MQ=255)                                                                                                gCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGc                                                >  5:143506/1‑149 (MQ=255)                                                                                                  aTCTGCCAGGCCACGCCAGCAACTACGTCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCa                                                                        <  5:295093/123‑1 (MQ=255)                                                                                                  aTCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCa                                                                        >  6:295093/1‑123 (MQ=255)                                                                                                       ccAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGc                                          <  6:107844/148‑1 (MQ=255)                                                                                                       ccAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGc                                          <  6:338298/148‑1 (MQ=255)                                                                                                       ccAGGCCACGCCAGCAACTACGGCGAGCTGTACAACATGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGc                                          <  3:75649/148‑1 (MQ=255)                                                                                                         aGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACTTCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCggg                                       <  1:111236/149‑1 (MQ=255)                                                                                                            ccACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTAc                                    >  6:224062/1‑149 (MQ=255)                                                                                                              aCGCCAGCAACTACGGCGAGCTGAACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTAccc                                  <  5:419997/149‑1 (MQ=255)                                                                                                                gCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCcgccgtagttgctggcgtggcctggcagatgcatgtcgaacccccagatgttacgcgggtcgtccttcaccaccggcggcgtgcgggtgccccagggcacgcagtgctcgggg                                <  2:6857‑M2/149‑114 (MQ=255)                                                                                                                 ccAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGa                                >  5:253917/1‑148 (MQ=255)                                                                                                                 ccAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGAc                               <  6:253917/149‑1 (MQ=255)                                                                                                                  cAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACa                              >  6:397712/1‑149 (MQ=255)                                                                                                                  cAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACa                              >  1:363949/1‑149 (MQ=255)                                                                                                                   aGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACAt                             >  4:85416/1‑149 (MQ=255)                                                                                                                     cAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCACGCGGGTACCCGACATCg                           >  6:308808/1‑149 (MQ=255)                                                                                                                        cTACGGCGAGCTGTACAACCTGTCGATCcgccgtagttgctggcgtggcctggcagatgcatgtcgaacccccagatgttacgcgggtcgtccttcaccaccggcggcgtgcgggtgccccagggcacgcagtgctcgg                                  >  7:53880‑M2/1‑28 (MQ=255)                                                                                                                        cTACGGCGAGCTGTACAACCTGTCGATCcgccgtagttgctggcgtggcctggcagatgcatgtcgaacccccagatgttacgcgggtcgtccttcaccaccggcggcgtgcgggtgccccagggcacgcagtgctcgg                                  <  8:53880‑M2/139‑112 (MQ=255)                                                                                                                        cTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCg                        >  7:245859/1‑149 (MQ=255)                                                                                                                        cTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCg                        <  8:245859/149‑1 (MQ=255)                                                                                                                                   tGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACcaccac             >  6:237816/1‑149 (MQ=255)                                                                                                                                        aaCCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGaa          >  5:139574/1‑147 (MQ=255)                                                                                                                                          ccTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGa      <  3:85416/149‑1 (MQ=255)                                                                                                                                           cTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGAt     <  2:363949/149‑1 (MQ=255)                                                                                                                                           cTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGAt     <  7:337490/149‑1 (MQ=255)                                                                                                                                              tCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGATGaa  <  1:413294/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                TTGCTGGCCGACCGCCCCGAGCACTGCGTGCCCTGGGGCACCCGCACGCCGCCGGTGGTGAAGGACGACCCGCGTAACATCTGGGGGTTCGACATGCATCTGCCAGGCCACGCCAGCAACTACGGCGAGCTGTACAACCTGTCGATCCGCCGTGGCACGCTGACTGACGAAGAACGCTTCAAGATCAACGAACACATCGTGCAGACCATCATCATGCTCAGTGCACTGCCGCTCCCGCGTCAGCTCAAGCGGGTACCCGACATCGCCGGCAACCACCACGAAAAGATGAA  >  NC_002947/2971438‑2971727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.