New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 346581160 (0.940)4 (0.060) 4/246 NT 6.1% intergenic (‑17/+230) aroF‑II/PP_mr39 tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA
?NC_002947 = 3465839 66 (1.070)intergenic (‑45/+202) aroF‑II/PP_mr39 tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase/P15 ncRNA

GCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGC  >  NC_002947/3465692‑3465983
                                                                                                                                                   |                                                                                                                                                
gCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCg                                                                                                                                                  <  1:400898/148‑1 (MQ=255)
  aTCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGAATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgcc                                                                                                                                               >  2:69246‑M2/1‑146 (MQ=255)
   tCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgccc                                                                                                                                              <  3:126261‑M2/149‑5 (MQ=255)
      gctgctTGAGCAGGTGCGGGCTGGGCAGGCATCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTAt                                                                                                                                           >  5:227212/1‑149 (MQ=255)
         gctTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATc                                                                                                                                          >  5:416002/1‑147 (MQ=255)
          ctTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       >  1:137061/1‑149 (MQ=255)
          ctTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  8:204535/149‑1 (MQ=255)
          ctTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  2:301381/149‑1 (MQ=255)
          ctTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  6:206221/149‑1 (MQ=255)
          ctTGAGCAGGTGCGGGCTGGGCAGGCATCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  6:227212/149‑1 (MQ=255)
              aGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  8:209287/145‑1 (MQ=255)
              aGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       >  7:209287/1‑145 (MQ=255)
                        ggCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgccc                                                                                                                                              >  1:411449‑M2/1‑124 (MQ=255)
                        ggCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgccc                                                                                                                                              <  2:411449‑M2/128‑5 (MQ=255)
                           tGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGtt                                                                                                                      <  4:126261/149‑1 (MQ=255)
                             ggCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGa                                                                                                                    <  2:137061/149‑1 (MQ=255)
                                 ggCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTc                                                                                                                <  7:158725/149‑1 (MQ=255)
                                         ctgACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGAc                                                                                                                              >  4:236130/1‑127 (MQ=255)
                                         ctgACAGTGGTGTTGGCAGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTAtt                                                                                                           <  6:89982/146‑1 (MQ=255)
                                           gACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCg                                                                                                               <  7:236045/140‑1 (MQ=255)
                                           gACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCg                                                                                                               >  8:236045/1‑140 (MQ=255)
                                                   tgtTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTgg                                                                                                         >  7:63418/1‑138 (MQ=255)
                                                   tgtTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTgg                                                                                                         <  8:63418/138‑1 (MQ=255)
                                                      tGGCCGCGTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCa                                                                                           <  4:32082/149‑1 (MQ=255)
                                                       ggCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTAGTGGCTGCTGCATTGCCAc                                                                                          >  6:330572/1‑149 (MQ=255)
                                                        gCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCAcc                                                                                         >  3:90764/1‑149 (MQ=255)
                                                        gCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCAc                                                                                          <  6:416002/148‑1 (MQ=255)
                                                         ccGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCt                                                                                        >  2:176224/1‑149 (MQ=255)
                                                          cGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTg                                                                                       >  3:187588/1‑149 (MQ=255)
                                                             ttGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTg                                                                                       >  1:267792/1‑146 (MQ=255)
                                                             ttGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTg                                                                                       >  6:338412/1‑146 (MQ=255)
                                                                 ggCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTagaaga                                                                                >  3:301106/1‑149 (MQ=255)
                                                                  gCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGAc                                                                               <  1:92592/149‑1 (MQ=255)
                                                                       gTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATc                                                                          <  5:338412/149‑1 (MQ=255)
                                                                        tCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCg                                                                         >  4:201352/1‑149 (MQ=255)
                                                                        tCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCg                                                                         >  7:359979/1‑149 (MQ=255)
                                                                          aGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGa                                                                       <  4:90764/149‑1 (MQ=255)
                                                                              gCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAggcg                                                                   >  4:401692/1‑149 (MQ=255)
                                                                                 gggCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAggcgg                                                                  >  3:61188/1‑147 (MQ=255)
                                                                                 gggCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCa                                                                <  2:267792/149‑1 (MQ=255)
                                                                                  ggCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAg                                                               >  6:269199/1‑149 (MQ=255)
                                                                                  ggCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGATGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAg                                                               >  8:338754/1‑149 (MQ=255)
                                                                                     gAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCt                                                            >  1:22808/1‑149 (MQ=255)
                                                                                      aGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTg                                                           <  8:359979/149‑1 (MQ=255)
                                                                                        gCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGc                                                         <  3:201352/149‑1 (MQ=255)
                                                                                               gCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACg                                                  >  1:203682/1‑149 (MQ=255)
                                                                                               gCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACg                                                  >  2:265346/1‑149 (MQ=255)
                                                                                                    cATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAg                                                                                                                                       <  4:14843/59‑1 (MQ=255)
                                                                                                    cATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGAtt                                             <  5:269199/149‑1 (MQ=255)
                                                                                                    cATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGAtt                                             <  4:187588/149‑1 (MQ=255)
                                                                                                       ggCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgcccagggaaaaacgccatgcacgcttccagcctcgccctgcccctgacccagccgcaagcggccaacaccactgtcagcagacgcctgcccagcccg                                                <  5:186164‑M2/143‑99 (MQ=255)
                                                                                                       ggCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgcccagggaaaaacgccatgcacgcttccagcctcgccctgcccctgacccagccgcaagcggccaacaccactgtcagcagacgcctgcccagcccg                                                >  6:186164‑M2/1‑45 (MQ=255)
                                                                                                        gCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGc                                          <  4:301106/148‑1 (MQ=255)
                                                                                                             tttCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAAt                                     <  4:61188/148‑1 (MQ=255)
                                                                                                             tttCCCTGAGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCAtt                                                                                               >  8:304872/1‑90 (MQ=255)
                                                                                                             tttCCCTGAGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCAtt                                                                                               <  7:304872/90‑1 (MQ=255)
                                                                                                              ttCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATc                                    <  2:203682/148‑1 (MQ=255)
                                                                                                                cccTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGc                                  >  2:110740/1‑148 (MQ=255)
                                                                                                                 ccTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGgcccagggaaaaacgccatgcacgcttccagcctcgccctgcccctgacccagccgcaagcggccaacaccactgtcagcagacgcctgcccagcccgcacctgctcaagcag                                 <  7:306281‑M2/148‑114 (MQ=255)
                                                                                                                 ccTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTg                                            >  8:209158/1‑137 (MQ=255)
                                                                                                                 ccTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTg                                            <  7:209158/137‑1 (MQ=255)
                                                                                                                    gggCGGACAGCGGGTTCAAGCCCGCATGGTCGgcccagggaaaaacgccatgcacgcttccagcctcgccctgcccctgacccagccgcaagcggccaacaccactgtcagcagacgcctgcccagcccgcacctgctcaagcag                                 <  5:112135‑M2/145‑114 (MQ=255)
                                                                                                                     ggCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGc                             <  1:176224/148‑1 (MQ=255)
                                                                                                                      gCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTgg                                                          <  4:169772/118‑1 (MQ=255)
                                                                                                                      gCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTgg                                                          >  3:169772/1‑118 (MQ=255)
                                                                                                                      gCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGc                                          <  4:149572/134‑1 (MQ=255)
                                                                                                                      gCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGc                                          >  3:149572/1‑134 (MQ=255)
                                                                                                                          aCAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGgt                       <  3:401692/149‑1 (MQ=255)
                                                                                                                              cGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGttt                   <  2:22808/149‑1 (MQ=255)
                                                                                                                              cGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGttt                   <  1:110740/149‑1 (MQ=255)
                                                                                                                               gggTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGttt                   <  8:145828/148‑1 (MQ=255)
                                                                                                                               gggTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGttt                   >  7:145828/1‑148 (MQ=255)
                                                                                                                                 gTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCg                >  4:393085/1‑149 (MQ=255)
                                                                                                                                     aaGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAg                               <  3:356076/130‑1 (MQ=255)
                                                                                                                                     aaGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAg                               >  4:356076/1‑130 (MQ=255)
                                                                                                                                       gCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGa                                               <  3:320287/112‑1 (MQ=255)
                                                                                                                                       gCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGa                                               >  4:320287/1‑112 (MQ=255)
                                                                                                                                               ggTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGc  >  4:399960/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
GCATCTGCTGCTTGAGCAGGTGCGGGCTGGGCAGGCGTCTGCTGACAGTGGTGTTGGCCGCTTGCGGCTGGGTCAGGGGCAGGGCGAGGCTGGAAGCGTGCATGGCGTTTTTCCCTGGGCGGACAGCGGGTTCAAGCCCGCATGGTCGGCCCTATCGAGGTGTTCGACAGATCGTTGAGTTCGTATTGGCTGCTGCATTGCCACCTGTAGAAGACCGATCGGAGGCGGCAGGCTGGCCCGAACGGGATTGGCTAAATCGCCAGGCGTAGGTGTTTGCGTAGTAATAAGTGGC  >  NC_002947/3465692‑3465983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.