New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4957290 =69 (1.080)6 (0.100) 4/246 NT 8.6% coding (228/792 nt) fliH flagellar assembly protein FliH
?NC_002947 4957335 = 61 (0.980)coding (183/792 nt) fliH flagellar assembly protein FliH

TCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACG  >  NC_002947/4957190‑4957481
                                                                                                                                                 |                                                                                                                                                  
tCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAgg                                                                                                                                                 <  1:332161/149‑1 (MQ=255)
cgacccggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCa                                                                                                                                                   >  1:226323‑M1/101‑147 (MQ=255)
cgacccggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCa                                                                                                                                                   >  4:216105‑M1/101‑147 (MQ=255)
 gacccggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAggg                                                                                                                                                >  6:86961‑M1/100‑149 (MQ=255)
   gCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTAGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGt                                                                                                                                               >  7:134025/1‑148 (MQ=255)
    ccGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTc                                                                                                                                              >  1:156299/1‑148 (MQ=255)
         accggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCa                                                                                                                                                   <  8:36632‑M1/47‑1 (MQ=255)
         accggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCa                                                                                                                                                   >  7:36632‑M1/92‑138 (MQ=255)
                 tCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGActtc                                                                                                                                >  1:30805/1‑149 (MQ=255)
                                 gggCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcc                                                                                                                >  3:305294/1‑149 (MQ=255)
                                 gggCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcc                                                                                                                >  5:423598/1‑149 (MQ=255)
                                    ccTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcg                                                                                                             <  6:413015/149‑1 (MQ=255)
                                       ctTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcgact                                                                                                          >  2:47717/1‑149 (MQ=255)
                                        ttCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcgactt                                                                                                         >  5:254247/1‑149 (MQ=255)
                                          cGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcgact                                                                                                          <  6:334353/146‑1 (MQ=255)
                                             cctcctGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcgacttcctcg                                                                                                    <  2:156299/149‑1 (MQ=255)
                                              ctcctGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCActtcctcgacttcctcga                                                                                                   <  7:153904/149‑1 (MQ=255)
                                                 ctGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGa                                                                                                <  7:312751/149‑1 (MQ=255)
                                                    gCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCACCGCCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCt                                                                                             >  4:63928/1‑149 (MQ=255)
                                                      gAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTg                                                                                                                                      <  5:178717/106‑1 (MQ=255)
                                                      gAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTg                                                                                                                                      >  6:178717/1‑106 (MQ=255)
                                                               gCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctcaggc                                                                                  <  7:18482/149‑1 (MQ=255)
                                                                   ggTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctcaggctca                                                                               <  4:305294/148‑1 (MQ=255)
                                                                       cTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCaggctcaggctc                                                                          <  5:189083/149‑1 (MQ=255)
                                                                          tgGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCActtcctcgacttcctcga                                                                                                   >  5:132546/1‑121 (MQ=255)
                                                                          tgGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCActtcctcgacttcctcga                                                                                                   <  6:132546/121‑1 (MQ=255)
                                                                          tgGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCgg                                                                       >  2:401908/1‑149 (MQ=255)
                                                                            gAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGtt                                                                     >  3:379571/1‑149 (MQ=255)
                                                                             aaGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTc                                                                    >  3:243078/1‑149 (MQ=255)
                                                                             aaGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTc                                                                    <  1:47717/149‑1 (MQ=255)
                                                                             aaGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTc                                                                    <  4:243078/149‑1 (MQ=255)
                                                                              aGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCg                                                                   >  2:369828/1‑149 (MQ=255)
                                                                               gCCCTCGCGCTCACCGGTTGCGATGCCATCGTTGTAAGCCTCCTGACGGAGGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCTACTTCCTCTATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCgt                                                                  <  8:197416/149‑2 (MQ=255)
                                                                                cccTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCggg                                                                 <  2:107028/149‑1 (MQ=255)
                                                                                     gcgcTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCg                                                            >  5:10779/1‑149 (MQ=255)
                                                                                         tCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCacttcctcga                                                                                                            >  6:97215/1‑97 (MQ=255)
                                                                                         tCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTc                                                        >  2:277192/1‑149 (MQ=255)
                                                                                            ccGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCgg                                                     <  1:369828/149‑1 (MQ=255)
                                                                                               ccctggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTc                                                  >  6:86961‑M2/51‑149 (MQ=255)
                                                                                                  tggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGt                                                          >  7:36632‑M2/48‑138 (MQ=255)
                                                                                                  tggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGt                                                          <  8:36632‑M2/91‑1 (MQ=255)
                                                                                                  tggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCg                                                 >  1:226323‑M2/48‑147 (MQ=255)
                                                                                                  tggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCg                                                 >  4:216105‑M2/48‑147 (MQ=255)
                                                                                                    GAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGc                                             <  7:384787‑M1/149‑1 (MQ=255)
                                                                                                    GAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGc                                             <  2:263943‑M1/149‑1 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTGCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTGTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCAGGTTCCGGGGCGAAGCTTGGc                                        <  3:63928/149‑1 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTcc                                                       <  4:199310/134‑1 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTcc                                                       >  3:199310/1‑134 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTgg                                         >  6:162148/1‑148 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGc                                        <  5:162148/149‑1 (MQ=255)
                                                                                                         ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGc                                        <  1:263943/149‑1 (MQ=255)
                                                                                                          cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTcc                                                       <  4:294268/133‑1 (MQ=255)
                                                                                                          cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTcc                                                       >  3:294268/1‑133 (MQ=255)
                                                                                                          cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTgg                                         >  5:124890/1‑147 (MQ=255)
                                                                                                          cTCGTTGTAAGCCTCCTGACGGAAGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTgg                                         >  4:250585/1‑147 (MQ=255)
                                                                                                           tCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAg                                      >  1:273786/1‑149 (MQ=255)
                                                                                                                 tAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCca                                <  2:273786/149‑1 (MQ=255)
                                                                                                                   aGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTGCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCcac                               <  6:10779/148‑1 (MQ=255)
                                                                                                                    gCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCcaca                              >  1:44244/1‑148 (MQ=255)
                                                                                                                         ctGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATcc                         <  6:423598/148‑1 (MQ=255)
                                                                                                                         ctGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCa                        >  4:175829/1‑149 (MQ=255)
                                                                                                                          aggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCAc                       <  3:216105‑M2/126‑1 (MQ=255)
                                                                                                                              ggATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGAACTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGcc                    >  4:364797/1‑148 (MQ=255)
                                                                                                                                aTGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTc                 <  2:44244/149‑1 (MQ=255)
                                                                                                                                 tGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCggg                                                    >  2:64715/1‑113 (MQ=255)
                                                                                                                                 tGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCggg                                                    <  1:64715/113‑1 (MQ=255)
                                                                                                                                   gCTTCGAGCTCTTCCAGGGTCAACGGCTTGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAg              <  6:254247/149‑1 (MQ=255)
                                                                                                                                   gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCtt                                           >  6:410459/1‑120 (MQ=255)
                                                                                                                                   gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCtt                                           <  5:410459/120‑1 (MQ=255)
                                                                                                                                   gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGa               <  3:250585/148‑1 (MQ=255)
                                                                                                                                   gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGa               <  3:364797/148‑1 (MQ=255)
                                                                                                                                     ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGTCTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACCCCCTCGAGGt            >  4:271847/1‑149 (MQ=255)
                                                                                                                                     ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGCCTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCCCACATCCACGCCCTCGAGGt            >  2:182529/1‑149 (MQ=255)
                                                                                                                                     ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTg                                          >  1:205903/1‑119 (MQ=255)
                                                                                                                                     ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTg                                          <  2:205903/119‑1 (MQ=255)
                                                                                                                                        gAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTcgc         >  2:184343/1‑149 (MQ=255)
                                                                                                                                        gAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTcgc         <  8:384787/149‑1 (MQ=255)
                                                                                                                                         aGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTcgcg        <  1:277192/149‑1 (MQ=255)
                                                                                                                                                cCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACg  >  8:167391‑M2/2‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTTGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACG  >  NC_002947/4957190‑4957481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.