New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5860423 =	58 (0.910)	4 (0.070)	4/240	NT	6.8%	coding (1306/1725 nt)	PP_5136	ABC transporter permease
	?	NC_002947	5860462 =	54 (0.890)					coding (1267/1725 nt)	PP_5136	ABC transporter permease

GCTTTCAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGAAGATCACGA  >  NC_002947/5860314‑5860608                                                                                                                                                     |                                                                                                                                                   gcTTTCAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGcc                                                                                                                                                    <  7:243977/149‑1 (MQ=255)   tttCAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGt                                                                                                                                                  >  2:379943/1‑149 (MQ=255)     tCAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGtt                                                                                                                                                 >  7:357853/1‑148 (MQ=255)      ccaacgcctgctcaaccatgcgctgcgcctgctcagcttcatccccatggccgtgccgggcctggtactgggcctgggctacgtattcttcttcaacctgaacgGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCa                                                                                                                                               >  7:221036‑M1/105‑149 (MQ=255)      cAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGCAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTc                                                                                                                                                <  6:214231/148‑1 (MQ=255)       aGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAg                                                                                                                                              <  6:212108/149‑1 (MQ=255)              gcgcGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTg                                                                                                                                          >  1:262247/1‑146 (MQ=255)                gcggcgGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTgaagaa                                                                                                                                     <  7:112925/149‑1 (MQ=255)                gcggcgGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTgaagaa                                                                                                                                     <  8:357853/149‑1 (MQ=255)                        cTCGAAGTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGt                                                                                                                             <  8:196319/149‑1 (MQ=255)                         tCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCCGCAACCCCATGCCGCCGTACAGCACATGGAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACg                                                                                                                              >  6:204922/1‑147 (MQ=255)                         tCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACg                                                                                                                              >  1:347503/1‑147 (MQ=255)                           gAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACCTGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgc                                                                                                                          >  2:360889/1‑149 (MQ=255)                           gAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgc                                                                                                                          >  2:354915/1‑149 (MQ=255)                           gAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgc                                                                                                                          >  8:212502/1‑149 (MQ=255)                            aaCTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACg                                                                                                                              <  7:30631/144‑1 (MQ=255)                            aaCTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACg                                                                                                                              >  8:30631/1‑144 (MQ=255)                              cTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgcc                                                                                                                         >  8:213180/1‑147 (MQ=255)                               tCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACCTGCAGCGGGTTGCCGTTCAGGTTGAAGAAGACTACGTAgccccg                                                                                                                      >  8:393475/1‑147 (MQ=255)                                 gCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgcccaggc                                                                                                                    >  6:14979/1‑149 (MQ=255)                                 gCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAgcccaggc                                                                                                                    >  3:61003/1‑149 (MQ=255)                                         gCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTAcc                                                                                                            <  3:391979/149‑1 (MQ=255)                                             gcgcAGGGCGGTGGTCGCGGTCATCTGCGCGGTTGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGc                                                                                                        <  3:37738/149‑1 (MQ=255)                                             gcgcAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAg                                                                                                          <  1:173740/147‑1 (MQ=255)                                             gcgcAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGc                                                                                                        >  8:46047/1‑149 (MQ=255)                                              cgcAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGcc                                                                                                       >  3:369744/1‑149 (MQ=255)                                               gcAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCGGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGccc                                                                                                      >  5:355748/1‑149 (MQ=255)                                                 aGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCgg                                                                                                    <  1:272157/149‑1 (MQ=255)                                                  gggCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCgg                                                                                                    >  8:10675/1‑148 (MQ=255)                                                      ggtggtCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACgg                                                                                               <  7:10675/149‑1 (MQ=255)                                                            cgcgGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTAcc                                                                                                            <  7:344116/130‑1 (MQ=255)                                                            cgcgGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTAcc                                                                                                            >  8:344116/1‑130 (MQ=255)                                                            cgcgGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATgg                                                                                         >  5:164157/1‑149 (MQ=255)                                                               ggTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACg                                                                                                <  8:391166/139‑1 (MQ=255)                                                               ggTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGCGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACg                                                                                                >  7:391166/1‑139 (MQ=255)                                                                      tGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCt                                                                               >  3:371349/1‑149 (MQ=255)                                                                        cgcgGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCt                                                                               <  1:294022/147‑1 (MQ=255)                                                                           ggtggtCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCa                                                                          <  1:379943/149‑1 (MQ=255)                                                                            gtggtCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAg                                                                         >  7:338489/1‑149 (MQ=255)                                                                                        tGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATg                                                             >  5:401248/1‑149 (MQ=255)                                                                                         gggCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGc                                                                           <  7:356563/134‑1 (MQ=255)                                                                                         gggCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGc                                                                           >  8:356563/1‑134 (MQ=255)                                                                                          ggCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATgg                                                            <  5:373722/148‑1 (MQ=255)                                                                                           gCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAg                                                                                 >  3:31911/1‑126 (MQ=255)                                                                                           gCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAg                                                                                 <  4:31911/126‑1 (MQ=255)                                                                                                   gCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCCGGCCCGGCGCGGCGAGGGGGATGCAGCGGAGCGGGCGGCGCGCGTGGTTGAGCGGGc                                                  >  2:300624/1‑149 (MQ=255)                                                                                                      caccacCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCACAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGtt                                               >  2:337337/1‑149 (MQ=255)                                                                                                       accaccAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCACAGTACCAGGCCCGGCACCGCAATGGGGATGAACCTGAGCAGGCGCAGCCCATCGTTGAGCAGGCGTTg                                              >  8:326244/1‑149 (MQ=255)                                                                                                        tgaacggcaacccgctgcatgtgctgtacggcggcatggggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTgg                                             >  7:221036‑M2/46‑149 (MQ=255)                                                                                                         caccaGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGc                                            >  3:227803/1‑149 (MQ=255)                                                                                                            caGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCt                                         >  3:278238/1‑149 (MQ=255)                                                                                                             aGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTg                                        <  4:61003/149‑1 (MQ=255)                                                                                                              GCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTgg                                       >  7:213180‑M1/1‑149 (MQ=255)                                                                                                                  cccgctgcatgtgctgtacggcggcatggggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGa                                                                             <  4:36887‑M2/72‑1 (MQ=255)                                                                                                                  cccgctgcatgtgctgtacggcggcatggggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGa                                                                             >  3:36887‑M2/36‑107 (MQ=255)                                                                                                                    cgctgcatgtgctgtacggcggcatggggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGtcttc                                 <  8:221036‑M2/116‑1 (MQ=255)                                                                                                                          cgccgTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCAt                            >  2:390555/1‑148 (MQ=255)                                                                                                                          cgccgTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATc                           <  4:278238/149‑1 (MQ=255)                                                                                                                            ccgTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAg                         <  8:338489/149‑1 (MQ=255)                                                                                                                               tACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTa                      <  5:204922/149‑1 (MQ=255)                                                                                                                                 cAGCACATGCAGCGGGTTGCCGTTCGGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGATGCTGAGCAGGCGCAGCGCATTGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAg                     <  6:355748/148‑1 (MQ=255)                                                                                                                                 cAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAgg                    <  4:371349/149‑1 (MQ=255)                                                                                                                                    cacaTGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCAc                 >  4:125596/1‑149 (MQ=255)                                                                                                                                       aTGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAg              >  1:335461/1‑149 (MQ=255)                                                                                                                                         gCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGt             >  1:289636/1‑148 (MQ=255)                                                                                                                                          cAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTtctc                               >  4:147987/1‑129 (MQ=255)                                                                                                                                          cAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTg            <  4:369744/148‑1 (MQ=255)                                                                                                                                          cAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGa           <  6:401248/149‑1 (MQ=255)                                                                                                                                          cAGCGGGTTGCCGGTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTtctc                               <  3:147987/129‑1 (MQ=255)                                                                                                                                           aGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGaa          <  7:46047/149‑1 (MQ=255)                                                                                                                                              gggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTg            >  5:145000‑M2/8‑144 (MQ=255)                                                                                                                                              gggttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGAAGAt       <  2:347503‑M2/142‑1 (MQ=255)                                                                                                                                                gttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTa                      >  8:94092‑M2/6‑132 (MQ=255)                                                                                                                                                gttgcCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTa                      <  7:94092‑M2/127‑1 (MQ=255)                                                                                                                                                    cCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGAAGATCACGa  <  6:164157‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCTTTCAGCGACAGCGCGGCGGCCTCGAACTCGCCGTCGAGCTGGCGCAGGGCGGTGGTCGCGGTCATCTGCGCGGTGGTCAGGTAATGGGCAATGGTGCACACCACCAGCAACCCCATGCCGCCGTACAGCACATGCAGCGGGTTGCCGTTCAGGTTGAAGAAGAATACGTAGCCCAGGCCCAGTACCAGGCCCGGCACGGCCATGGGGATGAAGCTGAGCAGGCGCAGCGCATGGTTGAGCAGGCGTTGGCCCTGGGTCTTCTCCATCAGGTAGGCACCAGTGAAGATCACGA  >  NC_002947/5860314‑5860608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.