| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914184 | 30 (0.470) | 6 (0.120) | 5/198 | NT | 19.5% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914224 | 26 (0.520) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG > NC_002947/5914076‑5914372 | cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCtgt > 3:32035/1‑149 (MQ=255) gAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgg > 4:32035‑M2/1‑146 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgg > 4:156805‑M2/1‑141 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggc > 4:370412‑M2/1‑139 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtg > 1:276710‑M2/1‑135 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgt > 7:253159‑M2/1‑135 (MQ=255) aCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTa > 5:211785/1‑149 (MQ=255) tttttGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGACGGCTGACGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTc < 6:211785/149‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAgg < 5:113728/104‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAgg > 6:113728/1‑104 (MQ=255) cgGGCAGGCCCGCCCCCGCTGGGTAATTTCTACGGCTCAAGCGGGTG‑AGTTA‑CATGGGGGAGCGGGGGTGCCGGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGccc < 7:2946/149‑1 (MQ=255) ggCACGCCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCcgc > 8:315393/1‑149 (MQ=14) gCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCtt < 3:226483/114‑1 (MQ=255) gCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCtt > 4:226483/1‑114 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATc > 4:89182/1‑110 (MQ=255) aCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATc < 3:89182/110‑1 (MQ=255) cGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGtt > 8:84106/1‑125 (MQ=255) cGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGtt < 7:84106/125‑1 (MQ=255) gCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCgg > 1:348225/1‑148 (MQ=255) cccGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgag < 5:109773‑M2/104‑62 (MQ=255) cccGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgag > 6:109773‑M2/1‑43 (MQ=255) ccGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactc < 2:60815‑M2/148‑107 (MQ=255) ccGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactc < 6:388181‑M2/148‑107 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgag < 1:74320‑M2/149‑110 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCgccgcccttgag > 5:244680/1‑140 (MQ=255) gCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCgccgcccttgag < 6:244680/146‑7 (MQ=255) gTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCAc > 5:318890/1‑149 (MQ=255) aTTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgaggtcggag > 5:388181‑M2/1‑32 (MQ=255) cGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTc > 1:86991/1‑149 (MQ=255) gAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCg > 5:244303/1‑149 (MQ=255) gAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCg > 5:91403/1‑149 (MQ=255) ggCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTgcgc > 1:138203/1‑94 (MQ=255) ggCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTgcgc < 2:138203/94‑1 (MQ=255) tGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGaa > 2:141523/1‑85 (MQ=255) tGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGaa < 1:141523/85‑1 (MQ=255) gCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGcc > 4:362963/1‑149 (MQ=255) aCTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTcg > 2:227062/1‑149 (MQ=255) ttA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTcgcg > 2:83361/1‑149 (MQ=255) cTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAAc > 3:196963/1‑149 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACcag > 5:62713/1‑149 (MQ=255) | CTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTG‑ACTTA‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG > NC_002947/5914076‑5914372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |