New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 746960	NA (NA)	45 (1.250)	35/286	0.1	95.8%	intergenic (‑87/‑707)	PP_0638/PP_5448	transposase/hypothetical protein
	?	NC_002947	= 748238	2 (0.060)					coding (291/819 nt)	PP_5449	hypothetical protein

GAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTAc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/746816‑746960 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAAAATCTC  <  NC_002947/748238‑748095                                                                                                                                                                                                                                                                                                   GAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAA                                                                                                                                               >  2:37193/1‑148  AAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAA                                                                                                                                              >  1:14990/1‑148  AAAGTACACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAA                                                                                                                                              >  2:120659/1‑148          CGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTC                                                                                                                                      <  5:27041/148‑1             GCTGGGGGGAGACGTACACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATC                                                                                                                                   <  7:131626/148‑1                  GGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAAC                                                                                                                                <  8:114762/146‑1                    GTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTA                                                                                                                            <  6:153854/148‑1                    GTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTA                                                                                                                            <  7:5797/148‑1                     TAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTAC                                                                                                                           <  1:120659/148‑1                          GTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTC                                                                                                                      >  7:33726/1‑148                          GTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTC                                                                                                                      >  1:68676/1‑148                          GTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTC                                                                                                                      >  1:134841/1‑148                               CTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCAC                                                                                                                 <  4:1112/148‑1                                   TTCGACTTTGCTGTCGGGGCGCATCATGTAGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGTAATCAGGTGGACGGTTTGAATGTGGTGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTAATCACCAA                                                                                                              <  2:44868/147‑1                                   TTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACA                                                                                                                                                >  7:88839/1‑113                                    TCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAAT                                                                                                             <  6:193057/147‑1                                    TCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAA                                                                                                                                               <  8:88839/113‑1                                      GACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCG                                                                                                           >  3:56697/1‑147                                            GCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGA                                                                                                     <  1:121706/147‑1                                            GCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGA                                                                                                     <  7:135681/147‑1                                            GCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGA                                                                                                     <  3:162872/147‑1                                                  GGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTT                                                                                              >  2:135344/1‑148                                                        CATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCA                                                                                        <  8:31945/148‑1                                                         ATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCA                                                                                        >  4:176128/1‑147                                                             TGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAG                                                                                   <  8:33726/148‑1                                                             TGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAA                                                                                    <  8:12150/147‑1                                                                 GGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATG                                                                               <  7:7700/148‑1                                                                             GAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACCAGCTATTTTTATCATCAAGGATGAGCTTCCCATCC                                                                   >  7:143100/1‑148                                                                             GAAAGAAATCGGGAGAACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTAACAAACTTCGCTCATAAACGTTACGCTTCATAACAAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCC                                                                   >  8:186782/1‑148                                                                              AAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGGTGGAAGGTGGGGATGAGGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCT                                                                  <  6:49470/148‑1                                                                                 GAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGACTGTGGGGATGATTGCTCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTT                                                               <  1:90777/148‑1                                                                                              CAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAAT                                                                                                             >  4:57736/1‑89                                                                                               AGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATC                                                                                                            <  3:57736/89‑1                                                                                                        AATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACC                                        <  4:56697/148‑1                                                                                                              GTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTA                                  >  1:171244/1‑148                                                                                                                 GACGGTTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATA                               <  6:13057/148‑1                                                                                                                      TTGGAATGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGA                          <  5:30765/148‑1                                                                                                                            TGTGGGGATGATGGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGAC                    <  1:37193/148‑1                                                                                                                                      ATGGATCCCTTACAAACTTCGCTCATCAACGTTACCCTTCATCACCAATCGTAACCAGCTATTTTTATCATCAAGGATTAGCTTCCCATCCTTTTGCGAAACGCTGAGCATACCAACCGGATTAATACAAGATGCGACAATATCTGC           >  5:167796/1‑147                                                                                                                                        GGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAA        <  3:176128/148‑1                                                                                                                                        GGATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGAT                         >  8:10477/1‑131                                                                                                                                         GATCCCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATG                        <  7:10477/131‑1                                                                                                                                             CCTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAAAATCT   >  6:182885/1‑148                                                                                                                                              CTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAAAATCTC  >  1:200764/1‑148                                                                                                                                              CTTACAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAAAATCT   <  5:93280/147‑1                                                                                                                                                                                                                                                                                                   GAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTAc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/746816‑746960 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAACTTCGCTCATCAACGTTACGCTTCATCACCAATCGTAACGAGCTATTTTTATCATCAAGGATGAGCTTCCCATCCTTTTGCGAAACGCTGAGCTTACCCACCGGCTTAATACCAGATGCGACAATATCTGCGAAAATCTC  <  NC_002947/748238‑748095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.