New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 746960	NA (NA)	45 (1.250)	35/286	0.1	95.8%	intergenic (‑87/‑707)	PP_0638/PP_5448	transposase/hypothetical protein
	?	NC_002947	= 748238	2 (0.060)					coding (291/819 nt)	PP_5449	hypothetical protein

GAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCT  >  NC_002947/746816‑747101                                                                                                                                                 |                                                                                                                                              gAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGc                                                                                                                                            >  6:27572/1‑148 (MQ=11)        cACGGGCATGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGaaa                                                                                                                                     >  2:169086/1‑148 (MQ=25)                   ggtagaggtagaCTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCGCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGcca                                                                                                                           <  7:157335/147‑1 (MQ=255)                        aggtagaCTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATa                                                                                                                      <  1:100562/147‑1 (MQ=255)                        aggtagaCTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATa                                                                                                                      <  5:15492/147‑1 (MQ=255)                                 ttttCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGCCGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGc                                                                                                            >  7:188250/1‑148 (MQ=255)                                   ttCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTg                                                                                                          >  1:16481/1‑148 (MQ=255)                                      gACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGt                                                                                                       >  3:74041/1‑148 (MQ=255)                                      gACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGt                                                                                                       >  3:82372/1‑148 (MQ=255)                                                                        ctCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTc                                                                       <  3:2022/146‑1 (MQ=255)                                                                         tCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTg                                                                    >  1:155327/1‑148 (MQ=255)                                                                            agaaagaaATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGa                                                                   <  6:20879/146‑1 (MQ=255)                                                                                agaaaTCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGc                                                             >  6:174656/1‑148 (MQ=255)                                                                                 gaaaTCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGc                                                             >  3:189664/1‑147 (MQ=255)                                                                                         gAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGAGCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTGCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTg                                                    <  3:13668/148‑1 (MQ=255)                                                                                          aGCACAGCATCGGGAATCAGGGGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAACCCCCAGCCACCATAGCTCAATGGCGGCGTTCAGCATCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTgg                                                   <  8:161258/148‑1 (MQ=255)                                                                                           gCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGc                                                  >  6:8895/1‑148 (MQ=255)                                                                                            cacaGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGAGGGAGCCCTGACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCt                                                 <  7:77000/148‑1 (MQ=255)                                                                                              caGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTga                                               <  1:169086/148‑1 (MQ=255)                                                                                                   tCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTc                                          <  2:16481/148‑1 (MQ=255)                                                                                                    cGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCa                                         <  8:85301/148‑1 (MQ=255)                                                                                                      gtaaTCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCAt                                        <  7:2955/145‑1 (MQ=255)                                                                                                       gAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAg                                      <  6:96648/148‑1 (MQ=255)                                                                                                                ggACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATAGCTCACGATTGGCTGAGATTCATAGGAAATTTCg                             >  5:74010/1‑148 (MQ=255)                                                                                                                  aCGGTTGGAATGTGGGGATGATGGAGCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTGCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCgg                            <  1:204558/147‑1 (MQ=255)                                                                                                                                     gatgGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCaccgac        <  7:96215/148‑1 (MQ=255)                                                                                                                                          aTCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTc   <  4:189664/148‑1 (MQ=255)                                                                                                                                           tCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCt  >  7:168184/1‑148 (MQ=255)                                                                                                                                           tCCCATACGCTTAGAAAACCCCAGCCACCATACCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCCGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTc   <  8:164583/147‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                              GAAAGTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCT  >  NC_002947/746816‑747101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.