| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 699672 | 128 (1.970) | 7 (0.140) +AAGTTCTGACAAGTAACTGCGTACGGCGA |
6/216 | 6.5 | 8.7% | intergenic (+65/‑179) | PP_t06/PP_23SD | tRNA‑Ala/23S ribosomal RNA |
| ? | NC_002947 | 5310821 = | 59 (0.910) | intergenic (‑232/+3) | PP_23SG/PP_t51 | 23S ribosomal RNA/tRNA‑Ala | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/699630‑699672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCA > NC_002947/5310821‑5310902 ||||||||||||||||||||||||||||| GTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCA > 1:203797/1‑123GTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCA < 2:203797/123‑1 GAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCG > 1:283769/1‑148 AACTTAGAAATGAACATTCAGTTCGAATGTTGATTTCTAAGTTCTGACAAGTGACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGta > 5:217019/1‑147 AACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGta > 6:265613/1‑147 TTAGAAATGAACATTCAGCTCGAATGTTCATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTAT < 3:47228/137‑1 TTAGAAATGAACATTCAGCTCGAATGTTCATTTCTAAGTTCTGACAAGTAACTGCGTACGGCGAAAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTAT > 4:47228/1‑137 ACAAGTAACTGCGTACGGCGAAAGTGGTGGAGTCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAG < 6:36951/85‑1 ACAAGTAACTGCGTACGGCGAAAGTGGTGGAGACAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAG > 5:36951/1‑85 ||||||||||||||||||||||||||||| GTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/699630‑699672‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGCA > NC_002947/5310821‑5310902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |