| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 3,733,549 | Δ59,784 bp | [PP_3300]–[PP_3355] | 55 genes [PP_3300], PP_3301, PP_3302, PP_3303, PP_3304, PP_3305, PP_3306, PP_3307, paoA, paoB, paoC, kefB‑II, PP_3312, PP_3313, PP_3314, PP_3315, PP_3316, PP_3317, PP_3318, PP_3319, PP_3320, PP_3321, hemBB, PP_3323, folEB, PP_3325, PP_3326, PP_3328, PP_5599, PP_3329, PP_5600, PP_3330, PP_3331, PP_3332, PP_3333, PP_5743, PP_3335, PP_3336, PP_3337, PP_3338, PP_3339, PP_3340, nikR, nikA, nikB, nikC, nikD, nikE, PP_3348, mhpT, PP_3350, atsA, PP_3353, PP_3354, [PP_3355] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3733549 | 3793332 | 59784 | 63 [0] | [0] 63 | [PP_3300]–[PP_3355] | [PP_3300],PP_3301,PP_3302,PP_3303,PP_3304,PP_3305,PP_3306,PP_3307,paoA,paoB,paoC,kefB‑II,PP_3312,PP_3313,PP_3314,PP_3315,PP_3316,PP_3317,PP_3318,PP_3319,PP_3320,PP_3321,hemBB,PP_3323,folEB,PP_3325,PP_3326,PP_3328,PP_5599,PP_3329,PP_5600,PP_3330,PP_3331,PP_3332,PP_3333,PP_5743,PP_3335,PP_3336,PP_3337,PP_3338,PP_3339,PP_3340,nikR,nikA,nikB,nikC,nikD,nikE,PP_3348,mhpT,PP_3350,atsA,PP_3353,PP_3354,[PP_3355] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3733548 | 0 (0.000) | 63 (0.970) | 52/274 | 0.3 | 100% | coding (237/615 nt) | PP_3300 | Transcriptional regulator, tetR family |
| ? | NC_002947 | 3793333 = | 0 (0.000) | coding (1190/1191 nt) | PP_3355 | beta‑ketothiolase | |||||
CCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCATTGCGACGGCCACCAGCGACGCCCCGACTGCATCGGAAAAGCTGAGACGTCTATTCCGAGCGATCGCTGAGGGCGGAGCTGACCTTTTCTTCCACGACCGGAAGCTCTATGACATAGCGGCAGTGGCATCTCGCGACCAATGGT > NC_002947/3733403‑3733693 | cccATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCTAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcag < 8:341295‑M1/149‑4 (MQ=255) ttATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaa < 3:383779‑M1/149‑8 (MQ=255) ggTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTGCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaa > 4:269158‑M1/1‑137 (MQ=255) cGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatga < 8:344275‑M1/148‑16 (MQ=255) cGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatga < 7:171603‑M1/148‑16 (MQ=255) gACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagg < 2:241338‑M1/149‑18 (MQ=255) aCAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgaggg > 8:96347‑M1/1‑131 (MQ=255) cAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggt > 5:362199‑M1/1‑130 (MQ=255) aaGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggtt > 8:41104‑M1/1‑129 (MQ=255) gACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttt > 6:171241‑M1/1‑127 (MQ=255) cACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcga > 8:302090‑M1/1‑124 (MQ=255) cACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcag > 6:79662‑M1/1‑124 (MQ=255) cACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTCATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGAGCcaggcaacgaaatgagtgttttaaa > 8:221043‑M1/1‑124 (MQ=255) tGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatca < 7:105051‑M1/149‑29 (MQ=255) gACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgc > 1:298203‑M1/1‑114 (MQ=255) aCTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggtttaggatcagcagcgc > 1:132756‑M1/1‑113 (MQ=255) aGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatg < 2:298203‑M1/148‑40 (MQ=255) aaaTCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGTTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttg < 1:303465‑M1/149‑45 (MQ=255) aaTCGATTGGCTTTTCAAAGGCCTACATCTACAAATTATTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttgg > 2:19104‑M1/1‑104 (MQ=255) gCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcatcgaaatga < 7:329691‑M1/110‑16 (MQ=255) gCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatga > 8:329691‑M1/1‑95 (MQ=255) cTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccga < 8:227248‑M1/149‑56 (MQ=255) tttCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatc < 7:128365‑M1/119‑28 (MQ=255) tttCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatc > 8:128365‑M1/1‑92 (MQ=255) cAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcat > 3:192885‑M1/1‑89 (MQ=255) aaaGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatg > 6:339269‑M1/1‑88 (MQ=255) aaaGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcat < 4:192885‑M1/148‑61 (MQ=255) aaaGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGAGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatg > 3:284842‑M1/1‑88 (MQ=255) cTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctg < 6:362199‑M1/149‑68 (MQ=255) cATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcga < 2:132756‑M1/149‑71 (MQ=255) tACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgc > 5:271243‑M1/1‑75 (MQ=255) aaaaattCTTCGAATCCAAACAAGGGATCTGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatg < 8:367439‑M1/144‑73 (MQ=255) aCAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgcca > 4:88494‑M1/1‑74 (MQ=255) aCAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatg > 7:367439‑M1/1‑74 (MQ=255) cAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgc < 3:269158‑M1/146‑74 (MQ=255) aaaTTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgcca > 4:90562‑M1/1‑72 (MQ=255) aaaTTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcga > 1:255277‑M1/1‑72 (MQ=255) aaaTTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcga < 2:255277‑M1/97‑26 (MQ=255) aTTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagc < 7:221043‑M1/149‑80 (MQ=255) ttcttcGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttg < 3:149532‑M1/113‑45 (MQ=255) ttcttcGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttg > 4:149532‑M1/1‑69 (MQ=255) cttcGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgc > 1:46926‑M1/1‑67 (MQ=255) cttcGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgc > 2:169882‑M1/1‑67 (MQ=255) ttcGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaa > 5:226599‑M1/1‑66 (MQ=255) cGAATCCAATCAAGCGATCGGAGAGGTGATTTGCTTGAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaattgtgggttttcgatcagcagcgcatgccttggccaccggcgatgcttgccgctgcgatgccatagcgcaa < 2:132116‑M1/146‑83 (MQ=255) cGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaag < 6:271243‑M1/148‑85 (MQ=255) tCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattga > 7:328298‑M1/1‑47 (MQ=255) gagaGGTTATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgg > 2:263917‑M1/1‑44 (MQ=255) gagaGGTGATTTGCTCCAGTCGGCTTTCGCTGATCATGCACCGCcaggcaacgaaatgagggttttcgatcagaagcgccatgccttggccaccgccgatgcatgccgcttcgatgccatagcgcaagttgcagtcgcgcaattcacgg > 8:321458‑M1/1‑44 (MQ=255) gagaGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgg > 8:35404‑M1/1‑44 (MQ=255) agagGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacggg < 7:321458‑M1/149‑107 (MQ=255) cAGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggac < 5:339269‑M1/147‑120 (MQ=255) aGTCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccag < 8:328298‑M1/149‑123 (MQ=255) tCGGCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggc > 2:176990‑M1/1‑25 (MQ=255) ggCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgc < 7:35404‑M1/149‑127 (MQ=255) gCTTGCGCTGATCATGCAGCGCcaggcaacgaaatgatggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgca < 1:19104‑M1/149‑128 (MQ=255) cgcTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgcagacc < 7:302090‑M1/148‑132 (MQ=255) cTGATCATGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgcagacctg > 6:294647‑M1/1‑15 (MQ=255) tGCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgcagacctgtagcggcc < 1:263917‑M1/149‑142 (MQ=255) gCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgcc < 6:261390‑M1/81‑75 (MQ=255) gCAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgcc > 5:261390‑M1/1‑7 (MQ=255) cAGCGCcaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgcagacctgtagcggccaa > 2:122957‑M1/1‑6 (MQ=255) gcgccaggcaacgaaatgagggttttcgatcagcagcgccatgccttggccaccgccgatgcatgccgctgcgatgccatagcgcaagttgccgtcgcgcaattgacgggccaaggtgtggaccaggcgcagacctgtagcggccaatg < 7:96347‑M1/149‑146 (MQ=255) | CCCATTATGGGTACGACAAGACCACTGTTTCTGACTTAGCCAAATCGATTGGCTTTTCAAAGGCCTACATCTACAAATTCTTCGAATCCAAACAAGCGATCGGAGAGGTGATTTGCTCCAGTCGGCTTGCGCTGATCATGCAGCGCATTGCGACGGCCACCAGCGACGCCCCGACTGCATCGGAAAAGCTGAGACGTCTATTCCGAGCGATCGCTGAGGGCGGAGCTGACCTTTTCTTCCACGACCGGAAGCTCTATGACATAGCGGCAGTGGCATCTCGCGACCAATGGT > NC_002947/3733403‑3733693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |