| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.030) | 44 (0.700) +CGGG |
38/266 | 1.0 | 95.8% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.030) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681271‑5681558 | aCCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgg < 1:185001‑M1/148‑4 (MQ=255) cGTAATACATGCAAACACAGACCTCCAGAGGTGGGCTGGGTTCCTCTTCTGATGCTGATGGCTTCGATCTTTGTGGGAGCGCCCTTCTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGACACTGCATGAACCGCcgggg > 3:28686‑M1/1‑143 (MQ=255) aaaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcc > 1:60960‑M1/1‑131 (MQ=255) tcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcaggcctaaagcgaca > 7:205404‑M1/1‑120 (MQ=255) aGGTGGGGTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCGTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcaacacaagg < 6:4658‑M1/149‑35 (MQ=255) ggtggggtggGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGGGAAGGGGCGCCAGGCGTTCATAGCGACTGCATGAACCGCcggggctgctgcgcagccctatcgctactgaagg < 4:28686‑M1/148‑35 (MQ=255) gCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTGGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctagcgcgacacaaggccgctc < 3:269475‑M1/149‑41 (MQ=255) tGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTAGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcc > 7:305188‑M1/1‑107 (MQ=255) ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGGGGCAGGGGCCTGGTGTCGCTAATGGGGCGCTAAGCGGCCCCAGGCTTTCATTGCCACTGCATTAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcc < 8:305188‑M1/146‑42 (MQ=255) tGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatagcgccacaaggccgcgccccctccagaccaccagg > 3:283494‑M1/1‑91 (MQ=255) gATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccacgccagcccaccaggccct > 5:196329‑M1/1‑87 (MQ=255) aTGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACAGCATGAACCGCccgggctgctgcgccgcccaatagcgacacaaggccgcacccacaccccaccaccacgcccag > 6:82695‑M1/1‑86 (MQ=255) tGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctg < 5:182498‑M1/148‑64 (MQ=255) ggCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgct < 3:211834‑M1/123‑40 (MQ=255) cTTCGTTCTTTGTGGGCGCGGCCTTGTGTCGCGAATGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctagcgcgacacaaggccgctcccactccagaccaccaggccctgcgcc < 5:82695‑M1/149‑68 (MQ=255) ttCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaacgccgctcccactaccgcccaccacgcccagcgcca > 6:272333‑M1/1‑81 (MQ=255) ttCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgcggcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgc < 5:272333‑M1/147‑67 (MQ=255) tttGTGGCAGGGGCCTTGTGCCGCTAATGGGGCGCGACGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacaaaaggccgctcccactccagaccaccaggccctgcgcctcacatc < 6:196329‑M1/148‑75 (MQ=255) tgGGAGCGGCCTTGTGGCGCGAAAGGGGCGCTAAGCGGCCCCTGGCTTTCATTGCCACTCCATCAACCGCcggggctgctgcgcagccctatcgccaaaaaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaa < 7:113248‑M1/148‑79 (MQ=255) cgcGGCCTTGTGTCGCTAATGGGGCGCGATGCGGCCCCAGGCTTTCATTGCCACTGCATGACCCGCcggggctgctgcgcagccctatcgctacacatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag < 4:283494‑M1/148‑84 (MQ=255) ccTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag < 4:318669‑M1/144‑84 (MQ=255) ccTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag < 5:25726‑M1/144‑84 (MQ=255) ccTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag > 3:318669‑M1/1‑61 (MQ=255) ccTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggcagctgcgcagccctatagcgacacaaggccgctcccacaccagaccaccaggcccggcgcctcacaacctaaccaaggaga > 6:25726‑M1/1‑61 (MQ=255) ttGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcac < 3:14361‑M1/130‑72 (MQ=255) tCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgctacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcag < 5:170736‑M1/149‑96 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttg > 7:352186‑M1/1‑52 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccct < 8:288691‑M1/114‑63 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccct > 7:288691‑M1/1‑52 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCAGCGCAGCCCAAAAACCACACAAAGCCGCGACCCCACCAAACCCCCAAGCCCAACGCCACACCAACAAAACAAAGTCAgggttgaca > 8:319463/1‑141 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccagg > 4:113721‑M1/1‑51 (MQ=255) cgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccagg < 3:113721‑M1/109‑59 (MQ=255) gcgAAGCGGCACCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTTATCACCCCTATCGCGAAACAAAGCCGCAACCACACCACACCACCAGGACCTGCGCCTCACATCCTAACCAACGTCAGGTTGCAAATCcccgaaacg > 6:149634/1‑143 (MQ=255) cGGCCCCAGGCTTTATTTGCAACTGCATGACCGGCgggggctgctgcgattccttatcgcgacaaatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccag < 8:205404‑M1/148‑114 (MQ=255) ccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttc > 3:354086‑M1/1‑30 (MQ=255) cTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatg < 4:354086‑M1/149‑125 (MQ=255) aTTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgacc > 2:214402‑M1/1‑20 (MQ=255) ttGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgacca < 5:149634‑M1/149‑131 (MQ=255) cACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgc < 7:169410‑M1/108‑94 (MQ=255) cACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccacgccctgcgccacacatcctaaccaaggtcaggtttc > 8:169410‑M1/1‑15 (MQ=255) cagcaaccgcgggggcggctgcccagccccatccccacacatgcccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggta < 6:299480‑M1/145‑140 (MQ=255) cATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggta < 7:319463‑M1/149‑140 (MQ=255) cATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggt < 8:352186‑M1/148‑139 (MQ=255) tGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacc > 6:102399‑M1/1‑8 (MQ=255) aCCGCcggggctgctgcgcagccctatcgcgacacaaggccgctccccctccagacccccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgccccagccattccaatgcgaccaggtccggtacccgc > 7:329125‑M1/1‑5 (MQ=255) cgccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgcgc < 2:60960‑M1/149‑147 (MQ=255) gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgcgcc > 3:168799‑M1/1‑2 (MQ=255) | ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681271‑5681558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |