| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.030) | 44 (0.700) +CGGG |
38/266 | 1.0 | 95.8% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.030) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681273‑5681558 | cgtaatacatgcaaacacagacctccagaggtgggctgggttcctcttctgatgctgatggcttcgatctttgtgggagcgcccttctgtcgcgaaaggggcgcgaagcggccccaggctttcattgacactgcatgaaccgccgggg > 3:28686‑M2/148‑148 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc > 1:60960‑M2/136‑149 (MQ=255) tcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGGCCTAAAGCGaca > 7:205404‑M2/125‑149 (MQ=255) aggtggggtgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggcgttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCAACACAAgg < 6:4658‑M2/30‑1 (MQ=255) ggtggggtgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgggaaggggcgccaggcgttcatagcgactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCTACTGAAgg < 4:28686‑M2/30‑1 (MQ=255) gctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggcctggtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAGCGCGACACAAGGCCGCTc < 3:269475‑M2/36‑1 (MQ=255) tgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtagcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTcc > 7:305188‑M2/112‑148 (MQ=255) ggttcctgttgtgatgctgatggcttcgttctttggggcaggggcctggtgtcgctaatggggcgctaagcggccccaggctttcattgccactgcattaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTcc < 8:305188‑M2/37‑1 (MQ=255) tgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATAGCGCCACAAGGCCGCGCCCCCTCCAGACCACCAgg > 3:283494‑M2/96‑149 (MQ=255) gatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACGCCAGCCCACCAGGCCCt > 5:196329‑M2/92‑149 (MQ=255) atggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccacagcatgaaccgcccggGCTGCTGCGCCGCCCAATAGCGACACAAGGCCGCACCCACACCCCACCACCAcgcccag > 6:82695‑M2/91‑147 (MQ=255) tggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTg < 5:182498‑M2/59‑1 (MQ=255) ggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCt < 3:211834‑M2/35‑1 (MQ=255) cttcgttctttgtgggcgcggccttgtgtcgcgaatggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAGCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGcc < 5:82695‑M2/63‑1 (MQ=255) ttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACTACCGCCCACCACGCCCAGCgcca > 6:272333‑M2/86‑148 (MQ=255) ttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcgc < 5:272333‑M2/62‑1 (MQ=255) tttgtggcaggggccttgtgccgctaatggggcgcgacgcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATc < 6:196329‑M2/70‑1 (MQ=255) tgggagcggccttgtggcgcgaaaggggcgctaagcggcccctggctttcattgccactccatcaaccgccgggGCTGCTGCGCAGCCCTATCGCCAAAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTaa < 7:113248‑M2/74‑1 (MQ=255) cgcggccttgtgtcgctaatggggcgcgatgcggccccaggctttcattgccactgcatgacccgccgggGCTGCTGCGCAGCCCTATCGCTACACATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 4:283494‑M2/79‑1 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg > 3:318669‑M2/66‑144 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 4:318669‑M2/79‑1 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAg < 5:25726‑M2/79‑1 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCAGCTGCGCAGCCCTATAGCGACACAAGGCCGCTCCCACACCAGACCACCAGGCCCGGCGCCTCACAACCTAACcaaggaga > 6:25726‑M2/66‑145 (MQ=255) ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcac < 3:14361‑M2/67‑1 (MQ=255) tcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCTACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAg < 5:170736‑M2/91‑1 (MQ=255) gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCt < 8:288691‑M2/58‑1 (MQ=255) gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCt > 7:288691‑M2/57‑114 (MQ=255) gcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTg > 7:352186‑M2/57‑144 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCAGCGCAGCCCAAAAACCACACAAAGCCGCGACCCCACCAAACCCCCAAGCCCAACGCCACACCAACAAAACAAAGTCAgggttgaca > 8:319463/1‑141 (MQ=255) cgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAgg > 4:113721‑M2/56‑109 (MQ=255) cgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAgg < 3:113721‑M2/54‑1 (MQ=255) gcgAAGCGGCACCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTTATCACCCCTATCGCGAAACAAAGCCGCAACCACACCACACCACCAGGACCTGCGCCTCACATCCTAACCAACGTCAGGTTGCAAATCcccgaaacg > 6:149634/1‑143 (MQ=255) cggccccaggctttatttgcaactgcatgaccggcggggGCTGCTGCGATTCCTTATCGCGACAAATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAg < 8:205404‑M2/109‑1 (MQ=255) ccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTc > 3:354086‑M2/35‑149 (MQ=255) ctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATg < 4:354086‑M2/120‑1 (MQ=255) attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAcc > 2:214402‑M2/25‑149 (MQ=255) ttgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCa < 5:149634‑M2/126‑1 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGc < 7:169410‑M2/89‑1 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCACACATCCTAACCAAGGTCAggtttc > 8:169410‑M2/20‑106 (MQ=255) catgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGt < 8:352186‑M2/134‑1 (MQ=255) catgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTa < 7:319463‑M2/135‑1 (MQ=255) cagcaaccgcggggGCGGCTGCCCAGCCCCATCCCCACACATGCCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTa < 6:299480‑M2/135‑1 (MQ=255) tgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAcc > 6:102399‑M2/13‑149 (MQ=255) accgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCCCTCCAGACCCCCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCCCCAGCCATTCCAATGCGACCAGGTCCGGTACCcgc > 7:329125‑M2/10‑149 (MQ=255) cgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc < 2:60960‑M2/142‑1 (MQ=255) gccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGcc > 3:168799‑M2/7‑149 (MQ=255) | CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCC > NC_002947/5681273‑5681558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |