| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 196893 = | NA (NA) | 4 (0.060) | 4/258 | NT | 13.3% | coding (2399/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 196920 = | 27 (0.380) | coding (2426/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
ACGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCAcggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/197040‑196893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC > NC_002947/196920‑197071 actCTGACGGTCGAAGCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGGCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCAC < 7:383254/146‑1ACGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGGTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCAC > 5:27146/1‑149 CGCTGACGGTCTAACCGTTGTTGTAGACGTTATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 1:369365/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 2:108956/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 7:239816/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 7:206034/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 4:73629/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 4:175731/149‑1 CGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 3:217820/149‑1 GCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGG < 8:54285/149‑1 GCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGG > 2:142697/1‑149 TGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTG < 2:84991/149‑1 TGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTG > 7:255463/1‑149 TGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTG > 4:317883/1‑149 TGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTG < 4:422073/149‑1 GACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTAAGGGTCACGGTG > 6:43231/1‑148 GGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTctag < 3:254407/148‑5 GGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG < 6:194051/110‑1 GGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACG > 5:194051/1‑110 CTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGT < 4:369088/143‑1 CTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGT > 3:369088/1‑143 GTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGT > 2:27531/1‑149 TCACCGGCGTCTGGGCAGGATTGCTCAGGGTCACGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTC > 8:23777/1‑149 CGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAAT < 3:154573/149‑1 CGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAC > 8:299421/1‑92 CGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAC < 7:299421/92‑1 GTGACAGTTACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTAGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTAACCATCGAGAAAGCAACAGCCCGTAATTT > 6:204363/1‑149 GTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTT > 2:423955/1‑149 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC < 4:7107/149‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC < 8:299151/149‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC < 7:276219/149‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC > 2:223703/1‑149 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC < 2:262356/149‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC < 6:179011/149‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGT < 2:291831/143‑1 TGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGT > 1:291831/1‑143 ACGCTGACGGTCGAACCGTTGTTGTAGACGTCATTCGCCGGGGTCTGGAAATCGACGCTGCCCTGGGTCTTGCCGGCTTCAACGGTAATGGTTTGGCCGTTGGACAGGGTCACTGTCACCGGCGTCTGGGCAGGATTGCTCAGGGTCAcggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/197040‑196893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTC > NC_002947/196920‑197071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |