| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 204734 = | 17 (0.240) | 6 (0.090) | 4/256 | NT | 10.2% | coding (10240/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 205438 = | 89 (1.300) | coding (10944/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GAAGGTGCGACCGTCTACATCCACAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/204886‑204734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAA > NC_002947/205438‑205584 GAAGGTGTGACCGTCTACATCCACAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGG > 3:55441/1‑149GAAGGTGCGACCGTCTACATCCACATCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGG < 6:89263/148‑1GAAGGTGCGACCGTCTACATCCACAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGG > 2:44255/1‑149GAAGGTGCGACCGTCTACATCCACAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGG < 4:37361/148‑1 AAGGTGCGACCGTCTACATCCTCAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGGT > 6:42123/1‑149 GCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCACGA‑CCAGGTC‑GTG‑AGCCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCG > 2:260601/1‑149 ATGGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCTCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGACGCCACTGGTGC > 7:70616/1‑149 GGTGACCTGGGCGTTGTTGCTCA‑GGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGAc < 3:241125/135‑2 GGTGACCTGGGCGTTGTTGCTCA‑GGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGAc > 4:241125/1‑134 GGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAGGGCGATGACGTTTACAACGATGCTGGCCAGAT < 3:345472/108‑1 GGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCATACACCCACGCTGCGCAGGGCGATGACGTTTACAACGATGCTGGCCAGAT > 4:345472/1‑108 GTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGACCCTGCAACTGCGCGG > 7:371866/1‑149 GTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGG > 1:96554/1‑149 ACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAA > 8:347768/1‑149 GAAGGTGCGACCGTCTACATCCACAGCAGACGTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGAGCAGCGTGGGTGTACGGCGCGCTGGTTTCACCGGCCTTGATGGTGACCTGGGCATTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/204886‑204734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAA > NC_002947/205438‑205584 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |