| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 302361 = | 102 (1.420) | 5 (0.070) | 4/260 | NT | 5.2% | coding (526/1314 nt) | envZ | osmolarity sensor protein EnvZ |
| ? | NC_002947 | 302434 = | 83 (1.190) | coding (599/1314 nt) | envZ | osmolarity sensor protein EnvZ | |||||
AGCATCAACTCACGCTCGCGCCCGGCCTGCTCGACATCCTCGGCCATCTGGTTGAACGCCTTGTACACCTCGGTCATCTCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/302512‑302361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTGATGCTGGCCGGGGTTTCCCACGACTTGCGCACGCCTCTGACGCGCCTGCGTCTGTCGCTGTCCTTGCTGAA > NC_002947/302434‑302578 AGCATCAACTCACGCTCGCGCCCGGCCTGCTCGACATCCTCGGCCATCTGGTTGAACGCCTTGTACACCTCGGTCATCTCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAA < 1:241658/149‑1 ATCAACTCACGCTCGCGCCCGGCCTGCTCGACATCCTCGGCCATCTGGTTGAACGCCTTGTACACCTCGGTCATCTCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCCGGCGGCGAACACCAAGag > 6:226406/1‑147 TCTCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTT > 8:94294/1‑149 TCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTG > 2:112289/1‑148 CGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTGAT > 5:225807/1‑149 CGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATCTCGAGCAGGCCGGGCGCGAGCGTGAGTTGAT > 6:387536/1‑149 GCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTG < 1:112289/146‑1 AGCGAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTGATGCTGGCCGGGGTTTCCCACGACTTGCGCACGCCTCTGACGCGCCTGCGTCTGTCGCTGTCCTTGCTGAA < 7:74400/149‑1 AGCATCAACTCACGCTCGCGCCCGGCCTGCTCGACATCCTCGGCCATCTGGTTGAACGCCTTGTACACCTCGGTCATCTCGCTGGGGGTATCGCTGATCGGCAGGCGCACACTGCGCCCCTGGCCAAGCTGGCGGGCGGCGAACACCAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/302512‑302361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgAGATGACCGAGGTGTACAAGGCGTTCAACCAGATGGCCGAGGATGTCGAGCAGGCCGGGCGCGAGCGTGAGTTGATGCTGGCCGGGGTTTCCCACGACTTGCGCACGCCTCTGACGCGCCTGCGTCTGTCGCTGTCCTTGCTGAA > NC_002947/302434‑302578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |