New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	659912 =	87 (1.210)	6 (0.090)	5/250	NT	7.2%	coding (958/1914 nt)	speA	biosynthetic arginine decarboxylase
	?	NC_002947	660014 =	74 (1.110)					coding (1060/1914 nt)	speA	biosynthetic arginine decarboxylase

GTCGGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/660066‑659912 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgccATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACCTACT  >  NC_002947/660014‑660158                                                                                                                                                                                                                                                                                                              GTCGGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCAC                                                                                                                                                         <  7:198147/149‑1  TCGGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACC                                                                                                                                                        <  5:234086/149‑1  TCGGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCAC                                                                                                                                                         >  7:184033/1‑148    GGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCAC                                                                                                                                                      >  7:209543/1‑149    GGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCA                                                                                                                                                       <  4:410634/148‑1                                                CAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGA                                                                                                          >  1:81415/1‑149                                                    ATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGAC                                                                                                      >  1:425218/1‑149                                                      GGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACG                                                                                                     >  4:61504/1‑148                                                                                                                CCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTG                                          <  3:61504/149‑1                                                                                                                            CAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACC                              <  2:425218/149‑1                                                                                                                            CAGAACTCCTTGAGCATGCCCACCACCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACC                              <  2:81415/149‑1                                                                                                                                                     CCACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACCT     <  2:388443/149‑1                                                                                                                                                     CCACACCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACC      >  1:116064/1‑148                                                                                                                                                       ACGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACCTAC   <  2:331597/149‑1                                                                                                                                                        CGCCATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACCTACT  >  7:345580/1‑149                                                                                                                                                                                                                                                                                                              GTCGGTACGTCGTCGTTGTGTTTCTCGACGTCGGTCACCTGGATCACCAGCATGGCGTGGTGCGCGGTCAGCGAACGGCCACTCTCGGAGAAGATGTGCGGGTGCGGCAAGCCCTGCGCGTCGCAGAACTCCTTGAGCATGCCCACCACCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/660066‑659912 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccacgccATGCTGGTGATCCAGGTGACCGACGTCGAGAAACACAACGACGACGTACCGACCATCGAGAACAAGGAAGCCCTGCCCGAGACCGTGCAGTGGCTGGTCGACCTGCTTGGCCCGACCGACATCGAGATGGTCACCGAGACCTACT  >  NC_002947/660014‑660158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.