New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1052149 | 71 (0.990) | 6 (0.090) | 6/254 | NT | 7.9% | coding (1218/1428 nt) | PP_0910 | hypothetical protein |
? | NC_002947 | = 1052174 | 72 (1.060) | coding (1193/1428 nt) | PP_0910 | hypothetical protein |
TACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1051996‑1052149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCACG < NC_002947/1052174‑1052028 tatGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCT > 3:146664/4‑149 CGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGG > 6:423311/1‑149 GAAATTGCGTGCCGCCTCGGCTTCGCCACCATGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGC < 5:3913/149‑1 AAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCC > 5:17009/1‑149 TGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGC < 2:250166/149‑1 ACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAG > 1:242369/1‑148 CAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGA < 8:334172/149‑1 AGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGAC < 2:242369/149‑1 GGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGG > 7:341757/1‑124 GGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGG < 8:341757/124‑1 GCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGATACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCA > 7:250140/1‑149 GCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCA > 2:282060/1‑149 GCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCA > 4:146664/1‑149 GCCGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGG < 5:48617/147‑1 GCCGACGAGCGCACCGAATTCGCCGCCAACCGACAGGACTGGCGTACGCCGCCACTGTGCGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGATCCTGCATGACGGCCGAGCCCGCAACCTCCTTCAGGCCGTGCTGTGGCA > 2:182103/1‑149 CGACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCACG > 2:330266/1‑149 TACGAAATTGCGTGCCGCCTCGGCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1051996‑1052149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccgACGAGCGCACCGAATTCGCCGCCAACGGCCAGGACTGGCGTACGCCGCCACTGTGGGGCATCGGCCTGAGCGAAACGGTCAGTGGCCATAGCCAGTTCCTGCATGACGGCCGCGCCCGCAACCTGCTTGAGGCCGTGCTGTGGCACG < NC_002947/1052174‑1052028 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |