New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1098363	77 (1.070)	4 (0.060)	4/258	NT	5.3%	coding (216/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
	?	NC_002947	= 1098419	68 (0.990)					coding (160/525 nt)	kdsC	3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase

GCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1098211‑1098363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGC  <  NC_002947/1098419‑1098273                                                                                                                                                                                                                                                                                                              GCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCT                                                                                                                                                         >  8:335082/1‑149   CACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCAAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGG                                                                                                                                                       >  8:384904/1‑149                                                  CCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTG                                                                                                        >  8:206454/1‑149                                                          TCATAGCTTAGGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACG                                                                                                >  8:186346/1‑149                                                                    GGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAG                                                                                       <  7:206454/148‑1                                                                       CCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAAC                                                                                   <  7:186346/149‑1                                                                                                                                                       GCCTCGGGCGTGAGCACCGCGATCTTCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAG   <  5:332994/149‑1                                                                                                                                                         CTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGC  >  4:422298/1‑148                                                                                                                                                         CTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGC  >  6:337212/1‑148                                                                                                                                                                                                                                                                                                              GCCACCCGGCGAATCACCGGCAGGTCGGGCAGGTCGTCGCCCAGGTAAGCCACTTGATCATAGCTTAGGCCCAGTTCGGCGAGCAGGCCGTCAAGCACCACCAATTTGTCCTCCCGGCCTTGGTAGAGGTGCGGGATACCGAGGTTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1098211‑1098363 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGGAACCTCGGTATCCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGC  <  NC_002947/1098419‑1098273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.