| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1144390 = | 74 (1.030) | 8 (0.120) | 8/250 | NT | 9.8% | coding (296/414 nt) | PP_1004 | hypothetical protein |
| ? | NC_002947 | 1144443 = | 79 (1.180) | coding (243/414 nt) | PP_1004 | hypothetical protein | |||||
CCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1144546‑1144390‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaccttGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGAACTCGGTGGTCGGCAAGC > NC_002947/1144443‑1144588 CCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCGAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑G < 6:225970/149‑1CCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑G < 4:282624/149‑1 ACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCT < 2:17478/149‑1 CGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGAC < 6:326872/149‑1 CAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCT > 6:175906/1‑149 AGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTT > 3:426687/1‑149 GGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGCCCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGT > 5:366940/1‑149 GCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTG > 8:118748/1‑148 CCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGC > 8:31396/1‑128 CCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGC < 7:31396/128‑1 AAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACT > 5:239814/1‑149 AACCATCAGCATGCTGCTGTGCGCGGGCCTGATGGTTGCGCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTG > 3:313022/1‑149 GCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCG < 6:239814/149‑1 CGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGA < 7:118748/149‑1 CTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGAACTCGGTGGTCGG > 6:103147/1‑149 CTGACCTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGAACTCGGTGGTCGG < 3:172347/149‑1 CTTGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGAACTCGGTGGTCGGCAAGC > 8:119251/1‑149 CCACACGCAGTTCACCGCGCCTGTCGGCATGGCTGGAGAACCACCGGCTGTTCGGGCCAATTCTGCATAACTGGCGCAACGGCAAGGTGATCCAGCGCCGGGCCAAGGTCAGCGCAACCATCAGCATGCTGCTGTGCGCGGGCCTGAT‑‑‑‑‑‑GCTGACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1144546‑1144390‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaccttGGCCCGGCGCTGGATCACCTTGCCGTTGCGCCAGTTATGCAGAATTGGCCCGAACAGCCGGTGGTTCTCCAGCCATGCCGACAGGCGCGGTGAACTGCGTGTGGCGGCCCAGGCGGCCAGCAGGATGAACTCGGTGGTCGGCAAGC > NC_002947/1144443‑1144588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |